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SCNpilot_cont_300_bf_scaffold_3531_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3531_curated_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1834
DNA (1833bp) protein (611aa)
Chemotaxis protein {ECO:0000313|EMBL:KFG68638.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Methyl-accepting chemotaxis protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYB3_9RHIZ rbh
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein rbh
SCNpilot_cont_300_bf_scaffold_3531_curated_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2014..3219
DNA (1206bp) protein (402aa)
CheW protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y028_9PROT rbh
CheW protein {ECO:0000313|EMBL:EGY01128.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW rbh
SCNpilot_cont_300_bf_scaffold_3531_curated_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3216..4307
DNA (1092bp) protein (364aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3W6_CAUSK rbh
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4304..5158
DNA (855bp) protein (285aa)
CheR-type MCP methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
Chemotaxis protein methyltransferase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3W5_CAUSK rbh
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5158..7077
DNA (1920bp) protein (640aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] rbh
CheA signal transduction histidine kinase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3W4_CAUSK rbh
SCNpilot_cont_300_bf_scaffold_3531_curated_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7077..7334
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036444BE
Uncharacterized protein {ECO:0000313|EMBL:KFG68634.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3531_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7374..7754
DNA (381bp) protein (127aa)
response regulator receiver protein
Response regulator receiver protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3W3_CAUSK
Response regulator receiver protein {ECO:0000313|EMBL:ABZ72427.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_8
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7751..8383
DNA (633bp) protein (211aa)
CheC, inhibitor of MCP methylation n=1 Tax=Azospirillum amazonense Y2 RepID=G1XY86_9PROT
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EGY01770.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
CheC, inhibitor of MCP methylation; K03410 chemotaxis protein CheC
SCNpilot_cont_300_bf_scaffold_3531_curated_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8389..10701
DNA (2313bp) protein (771aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XY87_9PROT rbh
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EGY01771.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
PAS/PAC sensor hybrid histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_3531_curated_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11009..11380)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003819B1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ69955.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..11722)
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QMN1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG61037.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_300_bf_scaffold_3531_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11828..12976)
DNA (1149bp) protein (383aa)
PHB depolymerase family esterase rbh
Esterase, PHB depolymerase family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZ92_CAUSK rbh
Esterase, PHB depolymerase family {ECO:0000313|EMBL:ABZ73421.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13085..13822)
DNA (738bp) protein (246aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin-disulfide reductase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWJ8_CAUSK
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:ABZ71626.1}; EC=1.8.1.9 {ECO:0000313|EMBL:ABZ71626.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_14
unknown

Not on your lists

14242..14529
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3531_curated_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14795..15142)
DNA (348bp) protein (116aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXP1_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ73253.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3531_curated_16
unknown

Not on your lists

15456..15656
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3531_curated_17
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15974..18121)
DNA (2148bp) protein (716aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
catalase n=1 Tax=alpha proteobacterium L41A RepID=UPI0003732807 rbh
catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6] rbh
SCNpilot_cont_300_bf_scaffold_3531_curated_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18910..19179)
DNA (270bp) protein (90aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM5_CAUST
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADG10554.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Displaying 18 items

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