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SCNpilot_cont_300_bf_scaffold_1808_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1808_curated_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..589)
DNA (588bp) protein (196aa)
transketolase central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase central region n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGJ8_CAUST
Transketolase central region {ECO:0000313|EMBL:ADG10441.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(586..1587)
DNA (1002bp) protein (334aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0ES97_CAUCE rbh
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
SCNpilot_cont_300_bf_scaffold_1808_curated_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2041..2367
DNA (327bp) protein (109aa)
Putative membrane protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H665_9CAUL
Putative membrane protein {ECO:0000313|EMBL:EJL30908.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
low temperature requirement A
SCNpilot_cont_300_bf_scaffold_1808_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2375..3199
DNA (825bp) protein (275aa)
low temperature requirement A
Low temperature requirement A n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R68_RHOP5
Low temperature requirement A {ECO:0000313|EMBL:ABJ05566.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3221..4504)
DNA (1284bp) protein (428aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Caulobacter sp. (strain K31) RepID=ENO_CAUSK rbh
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4501..5124)
DNA (624bp) protein (208aa)
GDSL-like lipase/acylhydrolase
GDSL-like lipase/acylhydrolase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH33_TISMK
GDSL-like lipase/acylhydrolase {ECO:0000313|EMBL:AFK52071.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5205..5387)
DNA (183bp) protein (61aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 n=4 Tax=Caulobacter RepID=RL32_CAUCN
SCNpilot_cont_300_bf_scaffold_1808_curated_8
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5478..6122)
DNA (645bp) protein (215aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH77496.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYS6_PSEUX
SCNpilot_cont_300_bf_scaffold_1808_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6135..6449
DNA (315bp) protein (105aa)
MarR family transcriptional regulator
Transcriptional regulator, MarR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SX10_CAUSK
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABZ70171.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6446..6886
DNA (441bp) protein (147aa)
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SX11_CAUSK
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABZ70172.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_11
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6883..7530
DNA (648bp) protein (216aa)
Glutathione S-transferase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QT65_9BURK rbh
Glutathione S-transferase {ECO:0000313|EMBL:ETF02510.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
SCNpilot_cont_300_bf_scaffold_1808_curated_12
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7535..7927)
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9M2_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:ABC63619.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8023..9672)
DNA (1650bp) protein (550aa)
CTP synthase n=1 Tax=Caulobacter sp. AP07 RepID=J3ACX2_9CAUL rbh
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] rbh
SCNpilot_cont_300_bf_scaffold_1808_curated_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9735..10220)
DNA (486bp) protein (162aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Preprotein translocase, SecG subunit n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYY2_CAUSK
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ABZ71893.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1808_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10307..11017)
DNA (711bp) protein (237aa)
Triosephosphate isomerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QM97_BREDI
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
SCNpilot_cont_300_bf_scaffold_1808_curated_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11272..12756
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPE7_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ83684.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] rbh
Displaying 16 items

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