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SCNpilot_cont_300_bf_scaffold_5238_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5238_curated_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1438)
DNA (1437bp) protein (479aa)
rfaE; rfaE protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] rbh
Bifunctional protein HldE n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAY5_PHEZH rbh
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_5238_curated_2
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1463..2329)
DNA (867bp) protein (289aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJH5_CAUST rbh
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
SCNpilot_cont_300_bf_scaffold_5238_curated_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2483..3706
DNA (1224bp) protein (408aa)
PREDICTED: uncharacterized protein LOC102331907 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17411 rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ENZ83877.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ENZ83877.1};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
SCNpilot_cont_300_bf_scaffold_5238_curated_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3795..5210)
DNA (1416bp) protein (472aa)
Anti-sigma factor transcriptional activator protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A687_RHIET
Anti-sigma factor transcriptional activator protein {ECO:0000313|EMBL:EGE60058.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_cont_300_bf_scaffold_5238_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5454..5600
DNA (147bp) protein (49aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Rhodanese-related sulfurtransferase n=1 Tax=Caulobacter sp. AP07 RepID=J3A2G0_9CAUL
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_5238_curated_6
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5597..6697)
DNA (1101bp) protein (367aa)
PREDICTED: uncharacterized protein LOC102344940 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1142C rbh
extracellular solute-binding protein family 3; K09969 general L-amino acid transport system substrate-binding protein rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADU14529.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_300_bf_scaffold_5238_curated_7
unknown

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comp(6640..7431)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5238_curated_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7688..7876
DNA (189bp) protein (63aa)
PREDICTED: putative cystathionine beta-lyase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15455
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase {ECO:0000313|EMBL:ACG78042.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_5238_curated_trna_1
unknown

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comp(7885..7958)
DNA (74bp)
transferRNA
Displaying 9 items

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