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SCNpilot_cont_300_bf_scaffold_5372_curated_12

Organism: scnpilot_dereplicated_Caulobacterales_1

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(9078..9521)

Top 3 Functional Annotations

Value Algorithm Source
exoribonuclease, VacB and RNase II family; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 142.0
  • Bit_score: 243
  • Evalue 3.10e-62
Ribonuclease R n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R959_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 142.0
  • Bit_score: 243
  • Evalue 9.80e-62
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 142.0
  • Bit_score: 243
  • Evalue 1.40e-61

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Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGAAGGACACGGCCGACCGGATCACCTTCGCCGAACGCCGCGCCATGGCCGCCGAGCGCGACGCCACCGATCGCTACGTCGCCGCCTTCCTGTCCGATCGCGTGGGGGCCGACTTTGGCGGCCGCATCACCGGCGTCACCCGCTTTGGCCTGTTTGTCCGCCTGACCGACACCGGCGCGGACGGCCTGGTGCCCGTCTCCAGCCTCGGCGACGAGTACTTCATCCACGACGACCGCATGCACGCCCTGGTCGGCGAGCGGACCGGCCGCCGCTGGCCGCTGGGCATGCCCGTCGAGGTGCGCCTGCGAGAGGCGACGCCGATCACCGGCGGGCTGCTGTTCGAGATGCTCAGCGACCCCGCGCCGCCCGACAAGACCGCCCCGCGGCCGCGTCTGACGCAGCGCCGAAGGGTCGAGCAGAGGCCTACTCGACGCAGGCGCTAG
PROTEIN sequence
Length: 148
MKDTADRITFAERRAMAAERDATDRYVAAFLSDRVGADFGGRITGVTRFGLFVRLTDTGADGLVPVSSLGDEYFIHDDRMHALVGERTGRRWPLGMPVEVRLREATPITGGLLFEMLSDPAPPDKTAPRPRLTQRRRVEQRPTRRRR*