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SCNpilot_cont_300_bf_scaffold_2659_curated_5

Organism: scnpilot_dereplicated_Caulobacterales_1

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 3721..4248

Top 3 Functional Annotations

Value Algorithm Source
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 155.0
  • Bit_score: 143
  • Evalue 3.90e-31
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 160.0
  • Bit_score: 133
  • Evalue 5.30e-29
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFZ0_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 160.0
  • Bit_score: 133
  • Evalue 1.70e-28

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Taxonomy

R_Brevundimonas_70_19 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGATCACAAGGCGCTGAGCTTGGTTTCCCGTCCCGAGGCGGACTGGAACGACCCTGAGGCGATGGACGACCTCTACCGGCGTCACGCCGCCTGGCTGGGCGACCGTCTGCGTCGTCGCTTCGGCCCCATGCTCGAGGCGGACGCCGAGGATCTGGTCCAGGAAACCTACGTCAAGCTGGCGCCGCATCAGGCCAGTCTGGTGCGCCGGCCCCGGGCGCTCCTGATGCGCGTCGCCTCGAACCTCGCCAAGGACCTGCTTCGCCGCAGAGCGGTGCGCAGCCGCCATGCCGAGACCGTCGGCCTCGATCCCGAAGCCGGCAAGACGCGGGACGACGCGGCCGGATTGCTGGCGGCCAAGGACGTGATCCTCTCCCTGCCCGCGGATTATCGCGATGTCTTCATCTTGAGCCGATTTCATCGTTTGACGTACGAGGAGATCGCCGAGCGCTGCGGAATATCCGTGAAATCGGTAGAGTGGCGCCTGCAAAAGGCGATCGCGCACTGCGCCAAGCGCCTTAAGGACTAG
PROTEIN sequence
Length: 176
MDHKALSLVSRPEADWNDPEAMDDLYRRHAAWLGDRLRRRFGPMLEADAEDLVQETYVKLAPHQASLVRRPRALLMRVASNLAKDLLRRRAVRSRHAETVGLDPEAGKTRDDAAGLLAAKDVILSLPADYRDVFILSRFHRLTYEEIAERCGISVKSVEWRLQKAIAHCAKRLKD*