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SCNpilot_cont_300_bf_scaffold_2659_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2659_curated_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VMJ1_CAUST
Uncharacterized protein {ECO:0000313|EMBL:ADG11714.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_2
unknown

Not on your lists

comp(887..1084)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_3
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1241..2890
DNA (1650bp) protein (550aa)
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGT4_METPB rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ACB82612.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2887..3324
DNA (438bp) protein (146aa)
activator of photopigment and puc with BLUF domain
Putative activator of photopigment and puc with BLUF domain n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CJD7_METED
Putative activator of photopigment and puc with BLUF domain {ECO:0000313|EMBL:ACS42052.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_5
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3721..4248
DNA (528bp) protein (176aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFZ0_PHEZH
SCNpilot_cont_300_bf_scaffold_2659_curated_6
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4262..5248
DNA (987bp) protein (329aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
FecR family protein; K07165 transmembrane sensor
FecR family protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H128_CAUCN
SCNpilot_cont_300_bf_scaffold_2659_curated_7
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5373..8393
DNA (3021bp) protein (1007aa)
Uncharacterized protein {ECO:0000313|EMBL:KDP95719.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
TonB-dependent receptor rbh
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REQ8_PHEZH rbh
SCNpilot_cont_300_bf_scaffold_2659_curated_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8398..10839
DNA (2442bp) protein (814aa)
hypothetical protein
Acylamino-acid-releasing enzyme n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H130_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK24675.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10749..11867)
DNA (1119bp) protein (373aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKJ5_CAUST
SCNpilot_cont_300_bf_scaffold_2659_curated_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..13127)
DNA (645bp) protein (215aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RER1_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:ACG78587.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_11
unknown

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comp(13177..13287)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_12
unknown

Not on your lists

comp(13349..13462)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13547..14164)
DNA (618bp) protein (206aa)
GntR family transcriptional regulator
Transcriptional regulator, GntR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RER2_PHEZH
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACG78588.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14514..14957
DNA (444bp) protein (148aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00036888CA
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2659_curated_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15641..16249
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC54493.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P991_9CAUL
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2659_curated_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16670..17056
DNA (387bp) protein (129aa)
hemerythrin HHE cation-binding domain-containing protein
Hemerythrin HHE cation binding domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZ93_CAUSK
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ABZ73422.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_17
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17244..17870)
DNA (627bp) protein (209aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0L3_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ72092.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_18
unknown

Not on your lists

comp(18094..19365)
DNA (1272bp) protein (424aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20134..21195
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000313|EMBL:KFA91707.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQ52_9SPHN rbh
PAS/PAC sensor hybrid histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_2659_curated_20
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21202..21384
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003804894
Uncharacterized protein {ECO:0000313|EMBL:ESQ76547.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2659_curated_21
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21542..21796
DNA (255bp) protein (85aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLC6_9RHOB
XRE family transcriptional regulator; K15773 HTH-type transcriptional regulator, antitoxin HipB
SCNpilot_cont_300_bf_scaffold_2659_curated_22
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21796..23121
DNA (1326bp) protein (442aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
toxin HipA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6904C rbh
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
SCNpilot_cont_300_bf_scaffold_2659_curated_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23689..24117)
DNA (429bp) protein (143aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D287_CAUCE
signal-transduction protein
SCNpilot_cont_300_bf_scaffold_2659_curated_24
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24452..24892
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISA3_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:ACI98339.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_300_bf_scaffold_2659_curated_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24895..25587
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q2H9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59320.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2659_curated_26
unknown

Not on your lists

comp(25598..26122)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_27
unknown

Not on your lists

comp(26472..27209)
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2659_curated_28
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27363..27557
DNA (195bp) protein (65aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
TraG/TraD family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W828_9CAUL
Displaying 28 items

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