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SCNpilot_expt_1000_bf_scaffold_8529_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8529_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..459)
DNA (459bp) protein (153aa)
Flp pilus assembly protein CpaB n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQU3_AFIFE
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EKS30784.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cpaB; flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
SCNpilot_expt_1000_bf_scaffold_8529_curated_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(650..1159)
DNA (510bp) protein (170aa)
Peptidase A24A prepilin type IV n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3U2_9BRAD
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:EFI52622.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
peptidase A24A prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
SCNpilot_expt_1000_bf_scaffold_8529_curated_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1231..1395)
DNA (165bp) protein (55aa)
Flp/Fap pilin protein; K02651 pilus assembly protein Flp/PilA
Flp/Fap pilin component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRF6_METNO
Flp/Fap pilin component {ECO:0000313|EMBL:ACL58696.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_8529_curated_4
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1503..2561)
DNA (1059bp) protein (353aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF68613.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X457_OCHA4
SCNpilot_expt_1000_bf_scaffold_8529_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2624..3079
DNA (456bp) protein (152aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL8_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ABS61851.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_8529_curated_6
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3154..4128)
DNA (975bp) protein (325aa)
Flp pilus assembly protein TadG n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WNL5_9BRAD
Flp pilus assembly protein TadG {ECO:0000313|EMBL:EJN14310.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_expt_1000_bf_scaffold_8529_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4104..5033)
DNA (930bp) protein (310aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07L46_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:ABJ07338.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_8529_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5271..5831
DNA (561bp) protein (187aa)
TadE-like
TadE-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ63_RHOP2
TadE-like {ECO:0000313|EMBL:ABD06497.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_8529_curated_9
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5831..5914
DNA (84bp) protein (28aa)
Pilus assembly protein CpaE n=1 Tax=Asticcacaulis sp. AC460 RepID=V4RHC2_9CAUL
Pilus assembly protein CpaE {ECO:0000313|EMBL:EAP90659.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
response regulator receiver protein; K02282 pilus assembly protein CpaE
Displaying 9 items

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