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SCNpilot_expt_1000_bf_scaffold_11381_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11381_curated_1
unknown

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1..219
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11381_curated_2
unknown

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comp(216..437)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11381_curated_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(689..1129)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Bordetella pertussis RepID=UPI000378BA5A
Tax=RBG_16_Chloroflexi_56_8_curated
SCNpilot_expt_1000_bf_scaffold_11381_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1305..1706
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003761E76
type II secretion system protein E; K02283 pilus assembly protein CpaF
Type II secretion system protein E {ECO:0000313|EMBL:ABS61859.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_11381_curated_5
unknown

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comp(1696..2130)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11381_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2462..2662
DNA (201bp) protein (67aa)
Pilus assembly protein {ECO:0000313|EMBL:KIZ45144.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ctpH; pilus assembly protein; K12510 tight adherence protein B
Type II secretion system protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133J2_RHOPS
SCNpilot_expt_1000_bf_scaffold_11381_curated_7
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2673..3638
DNA (966bp) protein (322aa)
type II secretion system protein; K12511 tight adherence protein C rbh
Type II secretion system protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ASM0_MARMM rbh
Type II secretion system protein {ECO:0000313|EMBL:ABI64717.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
SCNpilot_expt_1000_bf_scaffold_11381_curated_8
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4149..4967)
DNA (819bp) protein (273aa)
UPI0003CF941D related cluster n=1 Tax=unknown RepID=UPI0003CF941D rbh
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
modification methylase DpnIIA; K06223 DNA adenine methylase [EC:2.1.1.72]
SCNpilot_expt_1000_bf_scaffold_11381_curated_9
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4964..5413)
DNA (450bp) protein (150aa)
UPI0003CEAC99 related cluster n=1 Tax=unknown RepID=UPI0003CEAC99
Uncharacterized protein {ECO:0000313|EMBL:ESY00637.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
SCNpilot_expt_1000_bf_scaffold_11381_curated_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5430..7265)
DNA (1836bp) protein (612aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA09875.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein rbh
UPI0003CF6C5C related cluster n=1 Tax=unknown RepID=UPI0003CF6C5C rbh
SCNpilot_expt_1000_bf_scaffold_11381_curated_11
unknown

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comp(7550..7648)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11381_curated_12
unknown

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8161..9021
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11381_curated_13
unknown

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9031..9162
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 13 items

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