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SCNpilot_expt_1000_bf_scaffold_11432_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11432_curated_1
unknown

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comp(3..71)
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_2
unknown

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comp(986..1120)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_3
unknown

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comp(1220..1537)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_4
unknown

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2264..2365
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2395..3402
DNA (1008bp) protein (336aa)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methylopila sp. M107 RepID=UPI000370A39A rbh
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_expt_1000_bf_scaffold_11432_curated_6
unknown

Not on your lists

comp(4121..4327)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_7
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4477..4578
DNA (102bp) protein (34aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
phosphoglycerate kinase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034A11AD
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_expt_1000_bf_scaffold_11432_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4598..5617
DNA (1020bp) protein (340aa)
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
Fructose-bisphosphate aldolase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QFX5_RHOPT rbh
Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}; EC=4.1.2.13 {ECO:0000256|RuleBase:RU003994};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_expt_1000_bf_scaffold_11432_curated_9
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5736..6353
DNA (618bp) protein (206aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnet
thiE2; thiamine-phosphate synthase
Thiamine-phosphate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMY7_AZOBR
SCNpilot_expt_1000_bf_scaffold_11432_curated_10
unknown

Not on your lists

6463..7302
DNA (840bp) protein (280aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11432_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7410..7721
DNA (312bp) protein (104aa)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
elongation factor P n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FDE386
elongation factor P; K02356 elongation factor P
Displaying 11 items

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