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SCNpilot_expt_1000_bf_scaffold_4473_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4473_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1097)
DNA (1095bp) protein (365aa)
phosphoglucomutase/phosphomannomutase subunit alpha/beta; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRZ2_PARL1 rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:ABS62675.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_4473_curated_2
unknown

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comp(1640..1765)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4473_curated_3
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2263..2793
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI00037CCDDB
Uncharacterized protein {ECO:0000313|EMBL:ESQ79571.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4473_curated_4

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2883..5534
DNA (2652bp) protein (884aa)
Membrane alanine aminopeptidase N n=1 Tax=uncultured bacterium BLR9 RepID=C0INB2_9BACT rbh
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:ACN58798.1}; TaxID=506525 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR9.;"
pepN; aminopeptidase N (EC:3.4.11.2); K01256 aminopeptidase N [EC:3.4.11.2] rbh
SCNpilot_expt_1000_bf_scaffold_4473_curated_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5692..7125
DNA (1434bp) protein (478aa)
histidine kinase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A17DF1
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
multi-sensor signal transduction histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
SCNpilot_expt_1000_bf_scaffold_4473_curated_6
unknown

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comp(7143..7709)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4473_curated_7
unknown

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comp(9231..9374)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4473_curated_8
unknown

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comp(9399..9548)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4473_curated_9
unknown

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9739..9888
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4473_curated_10
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10245..10724)
DNA (480bp) protein (160aa)
S-adenosylmethionine decarboxylase-like protein (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSF5_RHOPH
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464, ECO:0000313|EMBL:CCG07834.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_expt_1000_bf_scaffold_4473_curated_11
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11168..12052
DNA (885bp) protein (295aa)
Spermidine synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GMG3_9PROT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
spermidine synthase
Displaying 11 items

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