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SCNpilot_expt_1000_bf_scaffold_10828_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10828_curated_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
amidohydrolase 2; K07046
Amidohydrolase 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025S4_SOLUE
Amidohydrolase 2 {ECO:0000313|EMBL:ABJ83245.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_1000_bf_scaffold_10828_curated_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(407..904)
DNA (498bp) protein (166aa)
hypothetical protein; K07046
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7USK9_RHOBA
Uncharacterized protein {ECO:0000313|EMBL:CAD73787.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
SCNpilot_expt_1000_bf_scaffold_10828_curated_3
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(915..1688)
DNA (774bp) protein (258aa)
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ50280.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
molybdenum ABC transporter substrate-binding protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D68DA6
extracellular solute-binding protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_10828_curated_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1692..2576)
DNA (885bp) protein (295aa)
6-phosphogluconolactonase n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S304_9PLAN
6-phosphogluconolactonase {ECO:0000313|EMBL:EMI25910.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
cycloisomerase
SCNpilot_expt_1000_bf_scaffold_10828_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3011..4000)
DNA (990bp) protein (330aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-] rbh
Probable fatty acid desaturase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLP0_9RHOB rbh
SCNpilot_expt_1000_bf_scaffold_10828_curated_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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4192..4782
DNA (591bp) protein (197aa)
Anthranilate synthase, amidotransferase component @ Para-aminobenzoate synthase, amidotransferase component # TrpAb@PabAb {ECO:0000313|EMBL:CDO61019.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CDO61019.1};; EC=4.1.3.27 {ECO:0000313|EMBL:CDO61019.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
trpG; anthranilate synthase, component II, glutamine amidotransferase (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
Anthranilate synthase, component II, glutamine amidotransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J805_HYPSM
SCNpilot_expt_1000_bf_scaffold_10828_curated_7
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4779..5786
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000381D4E9 rbh
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] rbh
SCNpilot_expt_1000_bf_scaffold_10828_curated_8
unknown

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comp(6142..6393)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10828_curated_9
unknown

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6671..6976
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 9 items

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