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SCNpilot_expt_1000_bf_scaffold_3046_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3046_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..677
DNA (675bp) protein (225aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUE7_9BRAD
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:EAQ36392.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
manC; mannose-1-phosphate guanyltransferase
SCNpilot_expt_1000_bf_scaffold_3046_curated_2
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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670..1422
DNA (753bp) protein (251aa)
CMP-N-acetylneuraminic acid synthetase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SCU8_HAHCH
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:ABC31526.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCNpilot_expt_1000_bf_scaffold_3046_curated_3
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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1422..2789
DNA (1368bp) protein (456aa)
Tax=RBG_16_Chloroflexi_52_11_curated
Glutamate-1-semialdehyde aminotransferase n=1 Tax=Campylobacter concisus UNSW1 RepID=U2EZ34_9PROT rbh
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
SCNpilot_expt_1000_bf_scaffold_3046_curated_4
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2795..3583
DNA (789bp) protein (263aa)
Tax=GWA2_Curvibacter_64_110_curated
Legionaminic acid biosynthesis protein PtmA n=1 Tax=Campylobacter concisus UNSW1 RepID=U2EZ00_9PROT
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3046_curated_5
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3679..4647)
DNA (969bp) protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:EWG98243.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
polysaccharide deacetylase rbh
Polysaccharide deacetylase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L3Y2_MAGSM rbh
SCNpilot_expt_1000_bf_scaffold_3046_curated_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4644..6050)
DNA (1407bp) protein (469aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC56289.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000365016A
dehydratase
SCNpilot_expt_1000_bf_scaffold_3046_curated_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6047..7090)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC56288.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L3Y5_MAGSM
SCNpilot_expt_1000_bf_scaffold_3046_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7103..8617)
DNA (1515bp) protein (505aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
FkbH-like protein rbh
FkbH like protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L3Y4_MAGSM rbh
SCNpilot_expt_1000_bf_scaffold_3046_curated_9
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9835..10215
DNA (381bp) protein (127aa)
MarR family transcriptional regulator {ECO:0000313|EMBL:KHQ96062.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Transcriptional regulator n=1 Tax=Pandoraea sp. RB-44 RepID=V5UCZ9_9BURK
MarR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3046_curated_10
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(10202..11380)
DNA (1179bp) protein (393aa)
Tax=RBG_16_RIF03_38_10_curated
SCNpilot_expt_1000_bf_scaffold_3046_curated_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13282..14265
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB79403.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Displaying 11 items

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