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SCNpilot_expt_1000_bf_scaffold_7425_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7425_curated_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO96678.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
hypothetical protein; K07112
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBY9_9SPHN
SCNpilot_expt_1000_bf_scaffold_7425_curated_2
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(177..377)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QML8_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAK33228.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
SCNpilot_expt_1000_bf_scaffold_7425_curated_3
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(400..825)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003109E45
Uncharacterized protein {ECO:0000313|EMBL:GAK33229.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
putative transporter component; K07112
SCNpilot_expt_1000_bf_scaffold_7425_curated_4
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(822..1739)
DNA (918bp) protein (306aa)
Zn-dependent hydrolase {ECO:0000313|EMBL:KFG88978.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
beta-lactamase n=1 Tax=Sphingobium chinhatense RepID=UPI0003744277 rbh
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6) rbh
SCNpilot_expt_1000_bf_scaffold_7425_curated_5
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1843..2466
DNA (624bp) protein (208aa)
Peroxiredoxin {ECO:0000313|EMBL:KFL47560.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
Putative peroxiredoxin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YR32_9SPHN
alkyl hydroperoxide reductase (EC:1.11.1.7); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
SCNpilot_expt_1000_bf_scaffold_7425_curated_6
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2463..2840
DNA (378bp) protein (126aa)
ArsR family transcriptional regulator {ECO:0000313|EMBL:EXS69719.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
ArsR family transcriptional regulator, partial n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003805C90
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7425_curated_7
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2861..3451)
DNA (591bp) protein (197aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Putative uncharacterized protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NNZ9_9FIRM
SCNpilot_expt_1000_bf_scaffold_7425_curated_8
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

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comp(3470..4897)
DNA (1428bp) protein (476aa)
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; mitosporic Ophiostomataceae; Sporothrix.;" source="Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183); (Rose-picker's disease fungus).;"
hypothetical protein
hypothetical protein PGUG_01202 n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=UPI000151ABA9
SCNpilot_expt_1000_bf_scaffold_7425_curated_9
unknown

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comp(5289..6623)
DNA (1335bp) protein (445aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7425_curated_10
unknown

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comp(6740..7201)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7425_curated_11
unknown

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comp(7235..7351)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7425_curated_12
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7517..7792)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YK36_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AHY54047.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_expt_1000_bf_scaffold_7425_curated_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7987..8679)
DNA (693bp) protein (231aa)
Acid phosphatase {ECO:0000313|EMBL:KJV35779.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IBB5_9SPHN rbh
phosphoesterase rbh
Displaying 13 items

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