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SCNpilot_expt_1000_bf_scaffold_3820_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3820_curated_1
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
UPI0003CF28B7 related cluster n=1 Tax=unknown RepID=UPI0003CF28B7
Cupin {ECO:0000313|EMBL:ESY76900.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3820_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206..973
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM34036.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037895B2
SCNpilot_expt_1000_bf_scaffold_3820_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(907..1635)
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY49467.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YAG0_9BRAD
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3820_curated_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1771..1911
DNA (141bp) protein (47aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D714_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:BAL12463.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_3820_curated_5
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1918..4059)
DNA (2142bp) protein (714aa)
peptidyl-dipeptidase DCP (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5] rbh
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:AHK72112.1}; EC=3.4.15.5 {ECO:0000313|EMBL:AHK72112.1};; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
Peptidyl-dipeptidase DCP n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FP26_GLUOX rbh
SCNpilot_expt_1000_bf_scaffold_3820_curated_6

Not on your lists

comp(4118..5029)
DNA (912bp) protein (304aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48466.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Soluble lytic murein transglycosylase and related regulatory proteins n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AS22_9CAUL
lytic transglycosylase
SCNpilot_expt_1000_bf_scaffold_3820_curated_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5229..6215
DNA (987bp) protein (329aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KFE64920.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
alkane 1-monooxygenase rbh
Alkane 1-monooxygenase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EV01_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_3820_curated_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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6458..6973
DNA (516bp) protein (172aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
SCNpilot_expt_1000_bf_scaffold_3820_curated_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7581..8219
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Z1_PELHB
SCNpilot_expt_1000_bf_scaffold_3820_curated_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8551..9258
DNA (708bp) protein (236aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Pyrrolo-quinoline quinone n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KQF5_9GAMM
pyrrolo-quinoline quinone
SCNpilot_expt_1000_bf_scaffold_3820_curated_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9413..10057
DNA (645bp) protein (215aa)
Phosphate transport regulator related to PhoU n=1 Tax=Caulobacter sp. AP07 RepID=J2H5F2_9CAUL
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:EJL38055.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein; K07220 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3820_curated_12
unknown

Not on your lists

comp(9982..10149)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3820_curated_13
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10180..10413)
DNA (234bp) protein (78aa)
Tax=RBG_16_Deltaproteobacteria_58_17_curated
SCNpilot_expt_1000_bf_scaffold_3820_curated_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10494..11057
DNA (564bp) protein (188aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Phosphate transporter n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T098_CAUSK
Phosphate transporter {ECO:0000313|EMBL:ABZ70544.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_3820_curated_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11184..11657
DNA (474bp) protein (158aa)
NTP pyrophosphohydrolase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EAI8_CAUCE
NTP pyrophosphohydrolase {ECO:0000313|EMBL:ENZ82498.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_3820_curated_16
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11647..12174)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003625E02
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
microcystin LR degradation protein MlrC
SCNpilot_expt_1000_bf_scaffold_3820_curated_17
unknown

Not on your lists

12289..12636
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3820_curated_18
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13137..13436)
DNA (300bp) protein (100aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT12_9PROT
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EFH09554.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EFH09554.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
gsiA; ABC superfamily ATP binding cassette transporter, ABC protein
SCNpilot_expt_1000_bf_scaffold_3820_curated_19
unknown

Not on your lists

13534..13785
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 19 items

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