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SCNpilot_expt_1000_bf_scaffold_6149_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6149_curated_1
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1247)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F07B91 rbh
TonB-dependent receptor domain protein {ECO:0000313|EMBL:EDX80968.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
TonB-dependent receptor protein rbh
SCNpilot_expt_1000_bf_scaffold_6149_curated_2
unknown

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comp(1210..2133)
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6149_curated_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3019..3723)
DNA (705bp) protein (235aa)
Transcriptional activator protein Anr n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2L6_9PROT
Transcriptional activator protein Anr {ECO:0000313|EMBL:EGY00232.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
anr; Transcriptional activator protein Anr; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_expt_1000_bf_scaffold_6149_curated_4

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comp(4055..5041)
DNA (987bp) protein (329aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO04704.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003726BE8 rbh
peptidase U32 rbh
SCNpilot_expt_1000_bf_scaffold_6149_curated_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5072..6067)
DNA (996bp) protein (332aa)
Collagenase {ECO:0000313|EMBL:EYD72891.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
Putative protease n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESB5_9RHOB rbh
peptidase U32; K08303 putative protease [EC:3.4.-.-] rbh
SCNpilot_expt_1000_bf_scaffold_6149_curated_6

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comp(6064..6474)
DNA (411bp) protein (137aa)
sterol-binding protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B577DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKO04702.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_6149_curated_7
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6826..8733
DNA (1908bp) protein (636aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
endoribonuclease L-PSP rbh
Endoribonuclease L-PSP n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTZ8_ACICJ rbh
Displaying 7 items

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