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SCNpilot_expt_1000_bf_scaffold_4969_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4969_curated_1
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..387
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
phosphoribosylglycinamide synthetase n=1 Tax=Sphingomonas melonis RepID=UPI0003777D8E
purL; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain protein
SCNpilot_expt_1000_bf_scaffold_4969_curated_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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384..1028
DNA (645bp) protein (215aa)
phosphoribosylglycinamide synthetase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003488A32
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria;
purL; phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
SCNpilot_expt_1000_bf_scaffold_4969_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1040..1321
DNA (282bp) protein (94aa)
BolA-like protein
BolA-like protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J611_HYPSM
BolA-like protein {ECO:0000313|EMBL:CCB64643.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1318..2280)
DNA (963bp) protein (321aa)
Ribosomal methyltransferase Rsm22 {ECO:0000313|EMBL:ETR76831.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ribosomal methyltransferase Rsm22 n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000366F650
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4969_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2374..2724
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000365A7A7
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glutaredoxin-like protein; K07390 monothiol glutaredoxin
SCNpilot_expt_1000_bf_scaffold_4969_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2824..3438)
DNA (615bp) protein (205aa)
30S ribosomal protein S4 n=1 Tax=Kaistia granuli RepID=UPI0003603CA5 rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_7
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4663..5019)
DNA (357bp) protein (119aa)
Alkylhydroperoxidase n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NK32_9CAUL
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC402.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4969_curated_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5023..5226)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RP25_9BRAD
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4969_curated_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5239..6516)
DNA (1278bp) protein (426aa)
sulfide-quinone reductase rbh
Sulfide-quinone reductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZVB8_9BRAD rbh
Sulfide-quinone reductase {ECO:0000313|EMBL:BAM90285.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6653..7018
DNA (366bp) protein (122aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212C1_RHOPB
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABD88765.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7008..7352
DNA (345bp) protein (115aa)
hypothetical protein
Rhodanese domain protein n=3 Tax=Acidiphilium RepID=A5FYC0_ACICJ
Rhodanese domain-containing protein {ECO:0000313|EMBL:KDM66321.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7891..8349
DNA (459bp) protein (153aa)
membrane protein, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B3B719
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KGJ66241.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_13
unknown

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comp(8905..9123)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4969_curated_14
unknown

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comp(9142..9339)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4969_curated_15
unknown

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comp(9373..9513)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4969_curated_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10353..11546
DNA (1194bp) protein (398aa)
acriflavin resistance protein rbh
Acriflavin resistance protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VE76_RHOPX rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ADU42807.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_17
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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13339..13770
DNA (432bp) protein (144aa)
NC domain protein {ECO:0000313|EMBL:GAK32146.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
SCNpilot_expt_1000_bf_scaffold_4969_curated_18
unknown

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comp(13991..14557)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4969_curated_19
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15067..17535
DNA (2469bp) protein (823aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HQJ9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ66329.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4969_curated_20
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18347..21193
DNA (2847bp) protein (949aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI0003773CDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ07338.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Displaying 20 items

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