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SCNpilot_expt_1000_bf_scaffold_9395_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9395_curated_1
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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1..369
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK33048.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWS5_RHOCS
SCNpilot_expt_1000_bf_scaffold_9395_curated_2
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

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comp(371..1144)
DNA (774bp) protein (258aa)
trypsin-like serine protease; K01362 [EC:3.4.21.-]
Trypsin-like serine protease n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7I1_ERYLH
Tax=MPI_Marinimicrobia_46_47
SCNpilot_expt_1000_bf_scaffold_9395_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1248..1550)
DNA (303bp) protein (101aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II96_9SPHN
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67019.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_9395_curated_4
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1735..3051
DNA (1317bp) protein (439aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1J7_METRJ rbh
SCNpilot_expt_1000_bf_scaffold_9395_curated_5
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3048..3458
DNA (411bp) protein (137aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FYD2_OCESG
Uncharacterized protein {ECO:0000313|EMBL:AEY00487.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas sp. (strain GK1).;"
SCNpilot_expt_1000_bf_scaffold_9395_curated_6
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3455..3892
DNA (438bp) protein (146aa)
Acetyltransferase {ECO:0000313|EMBL:GAJ29692.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000381D2C8
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9395_curated_7
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3894..4028
DNA (135bp) protein (45aa)
Strain A contig00089, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ53672.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
UPI0003D60D23 related cluster n=1 Tax=unknown RepID=UPI0003D60D23
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9395_curated_8
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4025..4903
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LH33_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC03951.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_expt_1000_bf_scaffold_9395_curated_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4917..5231)
DNA (315bp) protein (105aa)
HpcH/HpaI aldolase {ECO:0000313|EMBL:GAK44704.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UDW0_9RHOB
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9395_curated_10
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5431..5967
DNA (537bp) protein (179aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRI8_GRABC
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Displaying 10 items

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