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SCNpilot_expt_1000_bf_scaffold_14882_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14882_curated_1
unknown

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1..828
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14882_curated_2
unknown

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comp(986..1303)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14882_curated_3
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1563..1754
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Asticcacaulis RepID=V4PQZ5_9CAUL
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
SCNpilot_expt_1000_bf_scaffold_14882_curated_4
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2769..3161
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346900F
uhpB; two-component system, NarL family, sensor histidine kinase
Histidine kinase {ECO:0000313|EMBL:AKC70897.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCNpilot_expt_1000_bf_scaffold_14882_curated_5
unknown

Not on your lists

3472..3753
DNA (282bp) protein (94aa)
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8H8_HYPSM
LuxR family transcriptional regulator {ECO:0000313|EMBL:CPR20505.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_14882_curated_6
unknown

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comp(3943..4161)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14882_curated_7
unknown

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comp(4297..4458)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14882_curated_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4716..5762
DNA (1047bp) protein (349aa)
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT8_PARL1
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_14882_curated_9
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5894..6871
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000381EAFD
Succinoglycan biosynthesis transport protein {ECO:0000313|EMBL:EAU43217.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
succinoglycan biosynthesis transporter
Displaying 9 items

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