name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_7856_curated_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1..1185
----------------- DNA (1185bp) protein (395aa) |
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein n=2 Tax=Sphingobium RepID=D4Z7J9_SPHJU
TonB-dependent receptor {ECO:0000313|EMBL:AJP72660.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
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SCNpilot_expt_1000_bf_scaffold_7856_curated_trna_1
unknown
|
Not on your lists |
1410..1481
----------------- DNA (72bp) |
transferRNA
|
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SCNpilot_expt_1000_bf_scaffold_7856_curated_2
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1571..2125
----------------- DNA (555bp) protein (185aa) |
Conserved domain protein {ECO:0000313|EMBL:GAN55326.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBS7_NITWC
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SCNpilot_expt_1000_bf_scaffold_7856_curated_3
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2136..2441)
----------------- DNA (306bp) protein (102aa) |
regulatory protein ArsR
Regulatory protein ArsR n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I1U2_RHOVT
Regulatory protein ArsR {ECO:0000313|EMBL:ADP70161.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
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SCNpilot_expt_1000_bf_scaffold_7856_curated_4
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2498..2851
----------------- DNA (354bp) protein (118aa) |
Alkylhydroperoxidase n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NK32_9CAUL
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC402.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7856_curated_5
unknown
|
Not on your lists |
2986..3360
----------------- DNA (375bp) protein (125aa) |
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7856_curated_6
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3480..4274)
----------------- DNA (795bp) protein (265aa) |
Alcohol dehydrogenase (EC:1.1.1.1)
rbh
Alcohol dehydrogenase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VLB9_9PROT
rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AGH98911.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AGH98911.1};; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
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SCNpilot_expt_1000_bf_scaffold_7856_curated_7
unknown
|
Not on your lists |
4313..4492
----------------- DNA (180bp) protein (60aa) |
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7856_curated_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4685..5212
----------------- DNA (528bp) protein (176aa) |
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7II95_XANP2
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
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SCNpilot_expt_1000_bf_scaffold_7856_curated_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5319..5825
----------------- DNA (507bp) protein (169aa) |
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2Q4_HERAR
|
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SCNpilot_expt_1000_bf_scaffold_7856_curated_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5980..6576
----------------- DNA (597bp) protein (199aa) |
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C142C7
protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
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SCNpilot_expt_1000_bf_scaffold_7856_curated_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6578..8140
----------------- DNA (1563bp) protein (521aa) |
Alpha-glucosyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA44_PHEZH
rbh
Alpha-glucosyltransferase {ECO:0000313|EMBL:ACG79548.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
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SCNpilot_expt_1000_bf_scaffold_7856_curated_12
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8099..8395)
----------------- DNA (297bp) protein (99aa) |
Iron-sulfur cluster assembly scaffold protein IscU {ECO:0000313|EMBL:KIL99395.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
Uncharacterized protein n=7 Tax=Rhodobacter capsulatus RepID=D5ATX4_RHOCB
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SCNpilot_expt_1000_bf_scaffold_7856_curated_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8586..9023)
----------------- DNA (438bp) protein (146aa) |
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305C9B3
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
integral membrane sensor signal transduction histidine kinase
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SCNpilot_expt_1000_bf_scaffold_7856_curated_14
unknown
|
Not on your lists |
9199..9732
----------------- DNA (534bp) protein (178aa) |
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7856_curated_15
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9971..10783)
----------------- DNA (813bp) protein (271aa) |
DNA-binding response regulator n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLL1_9RHIZ
rbh
DNA-binding response regulator {ECO:0000313|EMBL:ESR24135.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
chemotaxis protein CheY; K02483 two-component system, OmpR family, response regulator
rbh
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SCNpilot_expt_1000_bf_scaffold_7856_curated_16
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11070..11258
----------------- DNA (189bp) protein (63aa) |
Cold-shock protein n=2 Tax=Labrenzia RepID=U7GJH1_9RHOB
Cold-shock protein {ECO:0000313|EMBL:ERP96791.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
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