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SCNpilot_expt_1000_bf_scaffold_10604_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10604_curated_1
unknown

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comp(2..175)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_2
unknown

Not on your lists

comp(350..508)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_3
unknown

Not on your lists

comp(707..868)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_4
unknown

Not on your lists

comp(893..1657)
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_5
unknown

Not on your lists

comp(1670..1837)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_6
unknown

Not on your lists

comp(1880..2020)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_7
unknown

Not on your lists

comp(2117..2569)
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_8
unknown

Not on your lists

2841..3170
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_9
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3173..3703)
-----------------
DNA (531bp)
protein (177aa)
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW03_9PROT
glycolate oxidase, iron-sulfur subunit
SCNpilot_expt_1000_bf_scaffold_10604_curated_10
unknown

Not on your lists

3808..4116
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_11
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4434..5471)
-----------------
DNA (1038bp)
protein (346aa)
Tax=BJP_IG2158_Rhodobacterales_69_12
FAD linked oxidase domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JFI9_9PROT
FAD linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit
SCNpilot_expt_1000_bf_scaffold_10604_curated_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5545..7026)
-----------------
DNA (1482bp)
protein (494aa)
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49238.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glcD; glycolate oxidase subunit GlcD rbh
FAD-binding protein n=1 Tax=Xanthobacteraceae RepID=UPI00036A9C5F rbh
SCNpilot_expt_1000_bf_scaffold_10604_curated_13
unknown

Not on your lists

comp(7359..7577)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_14
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7691..8740
-----------------
DNA (1050bp)
protein (350aa)
putative murein transglycosylase rbh
Putative murein transglycosylase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WV19_PSEDE rbh
Putative murein transglycosylase {ECO:0000313|EMBL:AGI22552.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
SCNpilot_expt_1000_bf_scaffold_10604_curated_15
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8852..10159)
-----------------
DNA (1308bp)
protein (436aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000367A5C5 rbh
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:BAQ16181.1}; EC=2.4.1.129 {ECO:0000313|EMBL:BAQ16181.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
pbpC; penicillin binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-] rbh
SCNpilot_expt_1000_bf_scaffold_10604_curated_16
unknown

Not on your lists

10304..11044
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11156..12826)
-----------------
DNA (1671bp)
protein (557aa)
Alpha-2-macroglobulin, N-terminal:N/apple PAN n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU55_9PROT rbh
Alpha-2-macroglobulin, N-terminal:N/apple PAN {ECO:0000313|EMBL:CAM74162.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein; K06894 rbh
SCNpilot_expt_1000_bf_scaffold_10604_curated_18
unknown

Not on your lists

12931..13266
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_19
unknown

Not on your lists

14030..14794
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_20
unknown

Not on your lists

15443..15613
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_21
unknown

Not on your lists

15848..16042
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10604_curated_22
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16110..18035)
-----------------
DNA (1926bp)
protein (642aa)
TonB-denpendent receptor n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036CF8DA rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABZ72887.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_10604_curated_23
unknown

Not on your lists

18271..18447
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

Displaying 23 items

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