ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9672_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9672_curated_1

Not on your lists

2..259
DNA (258bp) protein (86aa)
Phosphate ABC transporter, ATPase subunit n=3 Tax=mine drainage metagenome RepID=T1BDL0_9ZZZZ
Phosphate ABC transporter, ATPase subunit {ECO:0000313|EMBL:EQD66558.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphate import ATP-binding protein pstB-like
SCNpilot_expt_1000_bf_scaffold_9672_curated_2
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(717..2276)
DNA (1560bp) protein (520aa)
Na+/solute symporter rbh
Na+/solute symporter n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UB80_DEIML rbh
Na+/solute symporter {ECO:0000313|EMBL:ADV68319.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
SCNpilot_expt_1000_bf_scaffold_9672_curated_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2273..2491)
DNA (219bp) protein (73aa)
Membrane protein {ECO:0000313|EMBL:KGM33352.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IB34_BEII9
SCNpilot_expt_1000_bf_scaffold_9672_curated_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2573..2863)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZH41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71224.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9672_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3223..3444)
DNA (222bp) protein (74aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HRX9_9BACT
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9672_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3505..5022)
DNA (1518bp) protein (506aa)
Mg chelatase related protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5N7_9PROT rbh
Mg chelatase related protein {ECO:0000313|EMBL:EKE78391.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein rbh
SCNpilot_expt_1000_bf_scaffold_9672_curated_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5099..5407)
DNA (309bp) protein (103aa)
Ferredoxin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R8_9BRAD
Ferredoxin VI {ECO:0000313|EMBL:CEG06815.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
fdx; ferrodoxin Fdx; K04755 ferredoxin, 2Fe-2S
SCNpilot_expt_1000_bf_scaffold_9672_curated_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5514..6557)
DNA (1044bp) protein (348aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Ferredoxin--NADP reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=FENR_PARL1 rbh
Ferredoxin--NADP reductase {ECO:0000255|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000255|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000255|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000255|HAMAP-Rule:MF_01685};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_9672_curated_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..6977
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
chorismate mutase, type II; K04782 isochorismate pyruvate lyase [EC:4.2.99.21]
Chorismate mutase, type II n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QKV5_BRESC
SCNpilot_expt_1000_bf_scaffold_9672_curated_10
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7068..7334)
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
Displaying 10 items

View Taxonomy