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SCNpilot_expt_1000_bf_scaffold_4448_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4448_curated_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1841
DNA (1839bp) protein (613aa)
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZ34_9PROT rbh
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:EKE75584.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
SCNpilot_expt_1000_bf_scaffold_4448_curated_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1848..3059)
DNA (1212bp) protein (404aa)
2-alkenal reductase n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028A2965
Putative serine protease do-like {ECO:0000313|EMBL:CCD95738.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCD95738.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
protease, Do family (EC:3.4.21.-)
SCNpilot_expt_1000_bf_scaffold_4448_curated_3
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3121..4083)
DNA (963bp) protein (321aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
UPI0003D68A73 related cluster n=1 Tax=unknown RepID=UPI0003D68A73 rbh
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] rbh
SCNpilot_expt_1000_bf_scaffold_4448_curated_4
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4224..4730
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN56560.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PA39_9CAUL
SCNpilot_expt_1000_bf_scaffold_4448_curated_5
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4976..5641)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD40302.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Prochlorococcus marinus (strain MIT 9211) RepID=A9BBH0_PROM4
SCNpilot_expt_1000_bf_scaffold_4448_curated_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5997..6485)
DNA (489bp) protein (163aa)
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
30S ribosomal protein S9 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C252_9RHIZ
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
SCNpilot_expt_1000_bf_scaffold_4448_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6489..6626)
DNA (138bp) protein (46aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL13_RHOP2
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying 7 items

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