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SCNpilot_expt_1000_bf_scaffold_12913_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12913_curated_1
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2..250)
DNA (249bp) protein (83aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWG3_GRAMM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEU37766.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_expt_1000_bf_scaffold_12913_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1065..1793
DNA (729bp) protein (243aa)
Oxidoreductase {ECO:0000313|EMBL:AIT07572.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGI5_CAUST
SCNpilot_expt_1000_bf_scaffold_12913_curated_3
unknown

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comp(1783..2100)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12913_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2351..4423
DNA (2073bp) protein (691aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031D28A0 rbh
TonB-dependent receptor {ECO:0000313|EMBL:EKY30205.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_12913_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4433..4930
DNA (498bp) protein (166aa)
nuclear export factor GLE1
Nuclear export factor GLE1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2X3_CAUSK
Nuclear export factor GLE1 {ECO:0000313|EMBL:ABZ73795.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_12913_curated_6
unknown

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4920..5150
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12913_curated_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5262..5543
DNA (282bp) protein (94aa)
hypothetical protein; K09796 hypothetical protein
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FWV5_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:EGO93930.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_expt_1000_bf_scaffold_12913_curated_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5597..6157
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002DD104A
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12913_curated_9
unknown

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comp(6168..6554)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12913_curated_10
unknown

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comp(6819..6920)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 10 items

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