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SCNpilot_expt_1000_bf_scaffold_10637_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10637_curated_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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594..968
DNA (375bp) protein (125aa)
Cytochrome C peroxidase {ECO:0000313|EMBL:KEO93174.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
CzcA family heavy metal efflux protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS0_9SPHN
heavy metal efflux system protein
SCNpilot_expt_1000_bf_scaffold_10637_curated_2
unknown

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986..1285
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR17774.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCT7_9RHIZ
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10637_curated_3
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1282..2532
DNA (1251bp) protein (417aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
UPI0003CFB7D7 related cluster n=1 Tax=unknown RepID=UPI0003CFB7D7 rbh
heavy metal efflux system protein
SCNpilot_expt_1000_bf_scaffold_10637_curated_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(2544..3266)
DNA (723bp) protein (241aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYY6_9PLAN
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10637_curated_5
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4081..4683
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z7M0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME70320.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
SCNpilot_expt_1000_bf_scaffold_10637_curated_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4631..5392
DNA (762bp) protein (254aa)
chvI; transcriptional regulatory protein ChvI
Transcriptional regulatory protein ChvI n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMA9_TISMK
Transcriptional regulatory protein ChvI {ECO:0000313|EMBL:AFK53897.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_10637_curated_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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5376..6887
DNA (1512bp) protein (504aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
signal transduction histidine kinase rbh
Signal transduction histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQA7_AZOBR rbh
SCNpilot_expt_1000_bf_scaffold_10637_curated_8
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7135..8079
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7P5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32862.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10637_curated_9
unknown

Not on your lists

8115..8516
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10637_curated_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8574..8882)
DNA (309bp) protein (103aa)
RNA methylase id=12556110 bin=CNBR_ACIDO species=Chelatococcus sp. GW1 genus=Chelatococcus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RNA methylase
Displaying 10 items

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