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SCNpilot_expt_1000_bf_scaffold_6110_curated

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6110_curated_31
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19192..20151
DNA (960bp) protein (320aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
ribonucleotide reductase, alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYS5_MAGSA rbh
SCNpilot_expt_1000_bf_scaffold_6110_curated_32
unknown

Not on your lists

20161..20919
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6110_curated_33
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21068..22012)
DNA (945bp) protein (315aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:GAK44436.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
cyclohexadienyl dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E2D969 rbh
prephenate dehydrogenase; K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] rbh
SCNpilot_expt_1000_bf_scaffold_6110_curated_34
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22012..22731)
DNA (720bp) protein (240aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=HIS8_XANP2
Histidinol-phosphate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_6110_curated_35
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23244..24398
DNA (1155bp) protein (385aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYP8_RHOCS rbh
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_1000_bf_scaffold_6110_curated_36
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24395..25018
DNA (624bp) protein (208aa)
methionine biosynthesis MetW n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036CC58F
Methionine biosynthesis protein {ECO:0000313|EMBL:KJR62815.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
metW; methionine biosynthesis protein (MetW)
SCNpilot_expt_1000_bf_scaffold_6110_curated_37
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25032..25772)
DNA (741bp) protein (247aa)
Methyltransferase type 11 {ECO:0000313|EMBL:KJS35002.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SAM-dependent methyltransferase n=1 Tax=uncultured bacterium RepID=C5JB21_9BACT
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6110_curated_38
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25854..26609
DNA (756bp) protein (252aa)
gloB; glyoxalase II (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWW5_RHOCS
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_expt_1000_bf_scaffold_6110_curated_39
unknown

Not on your lists

comp(26606..26815)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6110_curated_40
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27022..27513
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X313_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00068.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6110_curated_41
unknown

Not on your lists

comp(27510..27725)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6110_curated_42
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27885..28274)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036B1C86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI58828.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_6110_curated_43
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28290..28664)
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aspartate decarboxylase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B49088
aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
SCNpilot_expt_1000_bf_scaffold_6110_curated_44
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28944..29162
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
id=3877107 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SCNpilot_expt_1000_bf_scaffold_6110_curated_45
unknown

Not on your lists

comp(29531..30091)
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6110_curated_46
unknown

Not on your lists

30094..30519
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6110_curated_47
unknown

Not on your lists

comp(31007..31366)
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying items 31-47 of 47 in total

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