name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_5706_curated_1
unknown
|
Not on your lists |
2..256
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_2
RLO_PLX_64_10, Bacteria
|
Not on your lists |
comp(741..1634)
|
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
amidohydrolase
Amidohydrolase 2 n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IYE1_CYCMS
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1733..3589
|
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
TPR repeat-containing protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BHH9_CHLPD
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3583..3837
|
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
tetratricopeptide tpr_1 repeat-containing protein n=1 Tax=Acidovorax radicis RepID=UPI000237784C
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase (EC:2.4.1.-)
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria
|
Not on your lists |
3839..5230
|
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
TPR repeat-containing protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B045
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_6
unknown
|
Not on your lists |
5330..5515
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_7
bacterium YEK0313, Bacteria
|
Not on your lists |
5597..6520
|
Transcriptional regulator NanR {ECO:0000313|EMBL:CEJ12016.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
UPI0003D64B87 related cluster n=1 Tax=unknown RepID=UPI0003D64B87
transcriptional regulator, GntR family
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6793..8241)
|
Uncharacterized protein {ECO:0000313|EMBL:KGM56910.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000377C997
rbh
sulfite reductase subunit alpha; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8411..8569
|
hypothetical protein
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0F4_STAND
Uncharacterized protein {ECO:0000313|EMBL:ADH91275.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_10
unknown
|
Not on your lists |
8602..8871
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_11
unknown
|
Not on your lists |
comp(8751..9026)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9064..9375
|
Conserved protein {ECO:0000313|EMBL:GAK46488.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV66_PARL1
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_13
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9369..10160)
|
thiol:disulfide interchange protein (EC:1.8.1.8)
Putative thiol:disulfide interchange protein n=4 Tax=Methylobacterium extorquens RepID=C5AR32_METEA
Putative thiol:disulfide interchange protein {ECO:0000313|EMBL:ACS42305.1}; EC=1.8.1.8 {ECO:0000313|EMBL:ACS42305.1};; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_14
unknown
|
Not on your lists |
10496..10732
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_15
unknown
|
Not on your lists |
10983..11099
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_16
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11462..12028
|
DNA methyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030BCD50
yhhF; methyltransferase with SAM-dependent methyltransferase domain; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Putative methyltransferase with SAM-dependent methyltransferase domain {ECO:0000313|EMBL:CCB67044.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_17
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12394..13275)
|
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y482_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGX99674.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_18
unknown
|
Not on your lists |
comp(13272..13595)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_19
unknown
|
Not on your lists |
comp(14278..14697)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_20
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14934..16256)
|
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
rbh
DNA mismatch repair protein MutL n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPT3_PARL1
rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_21
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16433..16915
|
Uncharacterized protein {ECO:0000313|EMBL:EWS52528.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Putative uncharacterized protein id=16923382 bin=RBG_16_Aminicenantes_63_16_plus species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_22
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16756..18030)
|
Glucose-6-phosphate isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPT2_PARL1
rbh
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_23
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18120..19583)
|
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036BF184
rbh
peptidase M16 (EC:3.4.24.-)
rbh
Peptidase M16, putative {ECO:0000313|EMBL:ACJ00939.1}; EC=3.4.24.- {ECO:0000313|EMBL:ACJ00939.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_24
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19580..20977)
|
zinc protease n=1 Tax=Xanthobacteraceae RepID=UPI00037EF7C4
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35113.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
peptidase M16 domain-containing protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20964..21539)
|
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPS9_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ABS61912.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_26
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21539..21940)
|
Lipoprotein signal peptidase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RWV9_9RHIZ
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22025..24991)
|
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Isoleucine--tRNA ligase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3J8_AZOL4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_28
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25014..25976)
|
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
rbh
Riboflavin biosynthesis protein RibF n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT1_PARL1
rbh
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5706_curated_29
unknown
|
Not on your lists |
comp(25985..26173)
|
This feature has no annotations |