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SCNpilot_expt_1000_bf_scaffold_13781_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13781_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1013
DNA (1011bp) protein (337aa)
Alpha/beta hydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHP2_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:AHB49464.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
alpha/beta hydrolase fold protein; K01048 lysophospholipase [EC:3.1.1.5]
SCNpilot_expt_1000_bf_scaffold_13781_curated_2
Monoraphidium neglectum, Monoraphidium, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(1045..1626)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ00384.1}; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium.;" source="Monoraphidium neglectum.;"
Uncharacterized protein n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4LRV7_PYROM
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13781_curated_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1981..2184)
DNA (204bp) protein (68aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.11)
Inositol-1-monophosphatase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWT9_RHOCS
Inositol-1-monophosphatase, putative {ECO:0000313|EMBL:ACJ00763.1}; EC=3.1.3.11 {ECO:0000313|EMBL:ACJ00763.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_1000_bf_scaffold_13781_curated_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2759..3982)
DNA (1224bp) protein (408aa)
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family rbh
Na(+)/H(+) antiporter NhaA n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILR0_METNO rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_13781_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4106..5071)
DNA (966bp) protein (322aa)
GTP-binding protein TypA; K06207 GTP-binding protein rbh
GTP-binding protein TypA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUL5_PARL1 rbh
GTP-binding protein TypA {ECO:0000313|EMBL:ABS63598.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_13781_curated_6
unknown

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5166..5447
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13781_curated_7
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5505..5969
DNA (465bp) protein (155aa)
Tax=RBG_16_Gallionellales_56_9_curated
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:921 RepID=R5KZA3_9CLOT
Displaying 7 items

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