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SCNpilot_expt_1000_bf_scaffold_10429_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10429_curated_1
unknown

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1..288
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10429_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(285..554)
DNA (270bp) protein (90aa)
hypothetical protein, partial n=1 Tax=Xanthomonas oryzae RepID=UPI00035E693D
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26795.1}; Flags: Fragment;; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Non-ribosomal peptide synthetase modules (EC:6.3.2.-)
SCNpilot_expt_1000_bf_scaffold_10429_curated_3
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(551..871)
DNA (321bp) protein (107aa)
Peptide synthetase {ECO:0000313|EMBL:KGJ03790.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003487F77
amino acid adenylation domain-containing protein
SCNpilot_expt_1000_bf_scaffold_10429_curated_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(965..2104)
DNA (1140bp) protein (380aa)
D-mannonate dehydratase n=1 Tax=Caulobacter sp. AP07 RepID=J2QC42_9CAUL
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
D-mannonate dehydratase (EC:4.2.1.8); K01686 mannonate dehydratase [EC:4.2.1.8] rbh
SCNpilot_expt_1000_bf_scaffold_10429_curated_5
unknown

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comp(2123..2266)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10429_curated_6
unknown

Not on your lists

2632..2838
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10429_curated_7
unknown

Not on your lists

3022..3243
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10429_curated_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3240..4229)
DNA (990bp) protein (330aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DEEDF
cyc4; cytochrome C binding protein
SCNpilot_expt_1000_bf_scaffold_10429_curated_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4226..5383)
DNA (1158bp) protein (386aa)
dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7B3CF rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ83205.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_1000_bf_scaffold_10429_curated_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5383..5931)
DNA (549bp) protein (183aa)
xylose isomerase domain-containing protein rbh
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0K4_TERSS rbh
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADV81067.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Displaying 10 items

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