ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11127_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11127_curated_1
unknown

Not on your lists

1..168
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11127_curated_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184..1143
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:AJR23588.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9V6_9SPHN
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11127_curated_3
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1196..2008)
DNA (813bp) protein (271aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:BAQ17621.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
beta-lactamase-like protein; K06167 PhnP protein rbh
Beta-lactamase-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT9_PARL1 rbh
SCNpilot_expt_1000_bf_scaffold_11127_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2005..2817)
DNA (813bp) protein (271aa)
Metal-dependent DNase(yabD) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYX5_9PROT rbh
Metal-dependent DNase(yabD) {ECO:0000313|EMBL:CDK98347.1}; EC=3.1.21.- {ECO:0000313|EMBL:CDK98347.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Mg-dependent DNase; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
SCNpilot_expt_1000_bf_scaffold_11127_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3857)
DNA (1041bp) protein (347aa)
DNA replication ATPase; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
ATPase involved in DNA replication n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT6_PARL1
ATPase involved in DNA replication {ECO:0000313|EMBL:ABS64719.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_11127_curated_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3864..4490)
DNA (627bp) protein (209aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7P4_AZOL4
SCNpilot_expt_1000_bf_scaffold_11127_curated_7
unknown

Not on your lists

5889..6065
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11127_curated_trna_1
unknown

Not on your lists

6642..6734
DNA (93bp)
transferRNA
SCNpilot_expt_1000_bf_scaffold_11127_curated_8
unknown

Not on your lists

6863..7060
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11127_curated_9
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7124..7447
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K464_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31334.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
esterase; K07214 enterochelin esterase and related enzymes
Displaying 10 items

View Taxonomy