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SCNpilot_expt_1000_bf_scaffold_7372_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 787..1260

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Novispirillum itersonii RepID=UPI0003655E4F similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 156.0
  • Bit_score: 230
  • Evalue 9.10e-58
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 156.0
  • Bit_score: 230
  • Evalue 1.70e-57
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 157.0
  • Bit_score: 227
  • Evalue 4.10e-57

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGAAAAGATCCCGATGACCGCCGCGGGCTTCAAGGGCCTGGAGGACGAACTGAACCGCCTGAAGAATGTGGACCGCCACGAGGTCATCAAGGCGATCGCCGAGGCGCGGGCGCATGGCGACCTGTCGGAGAATGCCGAATATCACGCCGCCAAGGAGCGCCAGAGCTTCATCGAGGGCCGGGTGATGGAACTGGAAGACCAGATCGGCCGCGCCGACGTCATCGACATCTCCAAGCTGTCGGGCAGCAGCGTCAAGTTCGGCGCCACCGTCACCCTGGTGGACGAGGACACCGACGAGGAGCGCAAGTATCAGATCGTGGGCGATGTGGAATCCGACGCCAAGAGCGGCCGCATTTCCCTGTCGTCTCCCATCGCCCGCGCCCTGATCGGAAAGACCAAGGGCGACACGGTGGAGGTCGCCGCCCCCGGCGGGGCGCGGTCGTATGAAATCCTCAAGGTCGAGTTTAAATAG
PROTEIN sequence
Length: 158
MEKIPMTAAGFKGLEDELNRLKNVDRHEVIKAIAEARAHGDLSENAEYHAAKERQSFIEGRVMELEDQIGRADVIDISKLSGSSVKFGATVTLVDEDTDEERKYQIVGDVESDAKSGRISLSSPIARALIGKTKGDTVEVAAPGGARSYEILKVEFK*