ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11007_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 11936..12418

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor {ECO:0000313|EMBL:KGF83337.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 145.0
  • Bit_score: 141
  • Evalue 1.00e-30
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDEF similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 146.0
  • Bit_score: 136
  • Evalue 3.10e-29
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 144.0
  • Bit_score: 131
  • Evalue 3.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GTGGAGTTCGGCGTTCCGCTGCTGAACGACACCTTCTGGGGCAAGGTTGACCTGTCGCTCGCTGGCCGTCATGCGCGGTACAGCACGGCCGGTGACGCCAACACCTGGAAGGTCGGTCTGACCTGGGACACCCCGCTGCCGGGCGTCCGCCTGCGCTCCATCATGTCGCGCGACATTCGTGCGCCCAACCTGTCGGAGCTGTTCTCGCCCAACCAGGGTCTGAATGGTGGCATCAACAACACCTTCCTGGCCGGTTCGCCGCAGCAGACGGTGCGCCAGCTGAACGTGGGTAACCCCACTCTGAGCCCGGAAAAGTCGCAGACCACGGAAATCGGCATCGTGTTCCAGCCGGAATTCCTGCCGGGATTCCAGACCTCGATCGACTATTGGCGCATCGGCGTGAAGCAGGTGATCCAGTCGCTGGGCCTGCAGACCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGGCGTGA
PROTEIN sequence
Length: 161
VEFGVPLLNDTFWGKVDLSLAGRHARYSTAGDANTWKVGLTWDTPLPGVRLRSIMSRDIRAPNLSELFSPNQGLNGGINNTFLAGSPQQTVRQLNVGNPTLSPEKSQTTEIGIVFQPEFLPGFQTSIDYWRIGVKQVIQSLGLQTVXXXXXXXXXXXXTA*