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SCNpilot_expt_1000_bf_scaffold_10743_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1128..1967)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:CDG84082.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 274.0
  • Bit_score: 351
  • Evalue 1.50e-93
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 275.0
  • Bit_score: 348
  • Evalue 2.20e-93
  • rbh
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IT71_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 275.0
  • Bit_score: 348
  • Evalue 6.90e-93
  • rbh

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGACATCGATCTTGCCAGAACCTTCCTGGCCGTCGTCGCGACGGGCAGCTTTCAGGGCGCCGCCGACCGCCTGAATGTCACCCAGACCGCCGTGAGCGCCCGCATCAAATCGCTGGAAGATGAGTTGGGGCGGCGGCTCTTTATCCGCAACAAGGCGGGGGCGCGGCTGACCGCTCCGGGCGAACGGTTCACCCGCCATGCCAACGCGCTGGTGCAGATCTGGGAAAGCGCCCACCGTCAGATCGCCCTGCCCGTCGGGCGCGAGCATCTGGTCAGCGTCGGCGGCGAACTCAGTCTCTGGAACCCGCTCTTCTCGGACTGGCTGGTCTGGATGCACCGCACGCGGCCCGAGATCGCGCTGCGGGCCGAGGTGGACACCTCCGCCCGGCTGGTGGAGCGCGTCCTGGTCGGCAGCCTCGATGCGGCGGTGCTGTACAGCCCGCAGCAACGGCCCAATCTGGTGGTCGAATTGCTGGCGGAGGAAAAGCTGGTGATGGTCACCACCGCACCCGACGGCCGCTACGACCCGGACAGCTATATCCATGTGGATTGGGGACCGGACTTCACGGCCAATGAGCAGAGCGCCTTTCCCGACCTGGCCGGTCCGCCCATCGCCATCTCGCTGGGGCCGCTGGCGCTGCATTATCTGATGACGGTGGGCGGCAGCGGCTATTTCCGCCAGGGCGCCGTGCAAGCCAGCCTGGAACAGGGCACGCTGCAGCGCGTCCGCGACGCGCCGGAATTTTCACACTCCATCCATCTCGTTCATGCCGAACAGGATGTGCCCGACCTGGCGAGCGTGCGCGAGGGCTTCCGCGCCTGTCTGCAGGCGTACTAG
PROTEIN sequence
Length: 280
VDIDLARTFLAVVATGSFQGAADRLNVTQTAVSARIKSLEDELGRRLFIRNKAGARLTAPGERFTRHANALVQIWESAHRQIALPVGREHLVSVGGELSLWNPLFSDWLVWMHRTRPEIALRAEVDTSARLVERVLVGSLDAAVLYSPQQRPNLVVELLAEEKLVMVTTAPDGRYDPDSYIHVDWGPDFTANEQSAFPDLAGPPIAISLGPLALHYLMTVGGSGYFRQGAVQASLEQGTLQRVRDAPEFSHSIHLVHAEQDVPDLASVREGFRACLQAY*