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SCNpilot_expt_1000_bf_scaffold_10743_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10743_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..587
DNA (585bp) protein (195aa)
protein NnrS
NnrS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG1_NITHX
NnrS {ECO:0000313|EMBL:ABE61536.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_10743_curated_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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644..1105
DNA (462bp) protein (154aa)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3B8_METSZ
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:CCJ05499.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_10743_curated_3
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1128..1967)
DNA (840bp) protein (280aa)
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:CDG84082.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IT71_BORPD rbh
SCNpilot_expt_1000_bf_scaffold_10743_curated_4
unknown

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comp(2368..3513)
DNA (1146bp) protein (382aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10743_curated_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3745..4005
DNA (261bp) protein (87aa)
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJA1_9SPHN
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000313|EMBL:CCW17031.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CCW17031.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
sulfite reductase (NADPH) flavoprotein alpha-component (EC:1.8.1.2); K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
SCNpilot_expt_1000_bf_scaffold_10743_curated_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3995..5743
DNA (1749bp) protein (583aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sulfite reductase subunit beta; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] rbh
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CYSI_NITHX rbh
SCNpilot_expt_1000_bf_scaffold_10743_curated_7
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5769..6404
DNA (636bp) protein (212aa)
peroxidase (EC:1.11.1.- 1.11.1.15) rbh
Peroxidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTP6_GRABC rbh
Uncharacterized protein {ECO:0000313|EMBL:AHJ62735.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_expt_1000_bf_scaffold_10743_curated_8
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6426..7574
DNA (1149bp) protein (383aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAQ16597.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAQ16597.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48] rbh
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQN6_METSB rbh
Displaying 8 items

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