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SCNpilot_expt_1000_bf_scaffold_8168_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5417..6106

Top 3 Functional Annotations

Value Algorithm Source
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_1000_bf_scaffold_8168_curated_5]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 233.0
  • Bit_score: 292
  • Evalue 1.20e-76
Proline--tRNA ligase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I470_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 233.0
  • Bit_score: 292
  • Evalue 3.70e-76

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACCCATGGCGACGATGACGGCCTGCGCCTGCCGCCCGCCATCGCGCCCCGCCAGATCGTGGTGGTGCCGATGCTGCGCGACAAGCCGGAAGACGCCGAGGTGTTGGCCTATTGCGAAAGCCTGGTGGCGGCGCTGTCCGGCCTCAGCGTGTTCGGCCAGCCCCTGCGGGCGCTGCTGGACACCAAGAAGATCAAGTCGGCGGAAAAACGCTGGAACTGGGTGCGGCGAGGCGCGCCGCTGATCCTGGAGATCGGTCCGCGCGACGCGGCGGGCGGCAATGTCACCTTCATGCGCCGTGACAGTTTGCGCGACGGCGACAAGGTCAAGTCCATCGCCTGCAGCCGTGCCGAATTCCTGGAGGAAAAGGCGGTGCAGCTTCTGGCGGAAATCCAGCATGGCCTCTATGCCGAGGCCAAGGCGCGGCTGGATGCCAATATCATTTCCGGCGTCACCGACTGGGCGGGCGTGGAAGCGTATTTCAGCGGCGACGAAGACGCCTTCAAGGGCTGGCTGAAAGTCTCCTGGTCGCGGCCCAGCGGGGCGGAACTGGATGCGGTGGAGCAGAAGCTCAAGGGCTTGAAGCTGACCATCCGTAACGCGCCGCTGTCGCAGCCTGACAGCTTCGCGCCCTGCCTGTTCACCGGCAAGCCGGGGGTGGAGGAAATCCTGATCGGACGGGCTTACTAG
PROTEIN sequence
Length: 230
MTHGDDDGLRLPPAIAPRQIVVVPMLRDKPEDAEVLAYCESLVAALSGLSVFGQPLRALLDTKKIKSAEKRWNWVRRGAPLILEIGPRDAAGGNVTFMRRDSLRDGDKVKSIACSRAEFLEEKAVQLLAEIQHGLYAEAKARLDANIISGVTDWAGVEAYFSGDEDAFKGWLKVSWSRPSGAELDAVEQKLKGLKLTIRNAPLSQPDSFAPCLFTGKPGVEEILIGRAY*