ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4393_curated_20

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 13271..14167

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAC1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 299.0
  • Bit_score: 439
  • Evalue 3.20e-120
  • rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:ERF81421.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 299.0
  • Bit_score: 439
  • Evalue 4.50e-120
acriflavin resistance protein; K07788 RND superfamily, multidrug transport protein MdtB similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 299.0
  • Bit_score: 431
  • Evalue 1.60e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGATCGCCATCCTGCTGGTGGGTCTGACGGGCTACAAATTCCTGCCGCTGTCGGCGCTGCCGCAGGTGGATTACCCCACCATCCAGGTTCAGACCTTCCTGCCGGGCGGCAGCCCGGAGGTGATGACCACCTCGGTCACCGCGCCCCTGGAGCGCCAGTTCGGCCAGATGCCGGGCCTGAAGGAAATGTCGTCGGTGTCCTCCGCCGGTTCCTCGGTGGTGACGCTGCAGTTCGACCTGTCGCTCAGTCTCGACATCGCCGAACAGCAGGTCCAGGCGGCGATCAACGCCGCCTCGAACCTGTTGCCCGCCTCGCTGCCCGCGCCGCCCATCTACGCCAAGGTCAATCCGGCCGACGCGCCGGTCATCACCCTGGCGGTGTCGTCGCGCAGCCTGCCCATCACCCAGATCGTGGACCTGTCGGAAACCCGCATCGCCCAGAAGATTTCGCAGCTTTCCGGCGTCGGCCTGGTGAGCATTTCGGGCGGCCAGCGGCCCGCGGTGCGGGTGCAGGCCAACCTGCAGAAACTGGCGGCGCTGGGCCTGAACATCGACGATCTGCGCACCACCATCTCCAACAACAATTCCAACTCGCCCAAGGGCAGCTTCGACGGCGCCTTCCAGTCCTACACCATCAACTCCAACGACCAGCTTCAGAGCGTCGAGGATTACAGCGACATCGTGGTGGCCTTCCGCAACGGCGCGCCGGTCTATCTGCGCGACGTCGCCAATGTGGTGGACGGGGCGCAGAACGACAAACTGGCAAGCTGGGCCGACAATACCCCGGCGGTGCTGATCAATGTGCAGCGCCAGCCCGGCGCCAATGTGATCGCGGTGGTGGATTCCATCAAGGAGCTGCTGCCGTCGATCAAGGCGGGGCTGCCCGCCTCGGTGGAC
PROTEIN sequence
Length: 299
MIAILLVGLTGYKFLPLSALPQVDYPTIQVQTFLPGGSPEVMTTSVTAPLERQFGQMPGLKEMSSVSSAGSSVVTLQFDLSLSLDIAEQQVQAAINAASNLLPASLPAPPIYAKVNPADAPVITLAVSSRSLPITQIVDLSETRIAQKISQLSGVGLVSISGGQRPAVRVQANLQKLAALGLNIDDLRTTISNNNSNSPKGSFDGAFQSYTINSNDQLQSVEDYSDIVVAFRNGAPVYLRDVANVVDGAQNDKLASWADNTPAVLINVQRQPGANVIAVVDSIKELLPSIKAGLPASVD