ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4393_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4393_curated_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_2
unknown

Not on your lists

217..555
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_3
unknown

Not on your lists

577..807
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_4
unknown

Not on your lists

814..918
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(980..1330)
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUF2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AFU44362.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4393_curated_6
unknown

Not on your lists

1431..2180
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2305..3465
DNA (1161bp) protein (387aa)
Oxidoreductase {ECO:0000313|EMBL:EWM10808.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031DF2D8 rbh
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4393_curated_8
unknown

Not on your lists

comp(3470..3664)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_9
unknown

Not on your lists

3862..4473
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4578..5537)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000370F3DA
Glycosyl transferase {ECO:0000313|EMBL:KEZ16962.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative glycosyltransferase
SCNpilot_expt_1000_bf_scaffold_4393_curated_11
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5574..6869)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003755516
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EQB30033.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
exoQ; exopolysaccharide production protein
SCNpilot_expt_1000_bf_scaffold_4393_curated_12
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6859..7716)
DNA (858bp) protein (286aa)
Putative glycosyltransferase n=1 Tax=Sphingobium sp. AP49 RepID=J2LBY6_9SPHN
Putative glycosyltransferase {ECO:0000313|EMBL:EJK84981.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
putative glycosyltransferase
SCNpilot_expt_1000_bf_scaffold_4393_curated_13
unknown

Not on your lists

7839..8051
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_14
unknown

Not on your lists

8109..8318
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_15
unknown

Not on your lists

8670..8984
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4393_curated_16
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9072..9944)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000363CD76
Glycosyl transferase WecB/TagA/CpsF {ECO:0000313|EMBL:EAT03386.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
SCNpilot_expt_1000_bf_scaffold_4393_curated_17
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9944..10480)
DNA (537bp) protein (179aa)
UDP-glucose lipid carrier transferase membrane protein (EC:2.7.8.6); K00996 undecaprenyl-phosphate galactose phosphotransferase [EC:2.7.8.6]
Putative UDP-glucose lipid carrier transferase putative membrane protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQ96_BRASO
Putative UDP-glucose lipid carrier transferase putative membrane protein {ECO:0000313|EMBL:CAL76072.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CAL76072.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_expt_1000_bf_scaffold_4393_curated_18
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10823..11365)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Serratia plymuthica A30 RepID=L0W6V4_SERPL
SNARE-like domain protein {ECO:0000313|EMBL:EUD05630.1}; TaxID=1256989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia alcalifaciens R90-1475.;"
DedA family protein
SCNpilot_expt_1000_bf_scaffold_4393_curated_19
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11736..13166
DNA (1431bp) protein (477aa)
mdtA; multidrug efflux system, subunit a; K07799 putative multidrug efflux transporter MdtA rbh
Multidrug efflux system, subunit A n=1 Tax=Ralstonia solanacearum RepID=D8N1P8_RALSL rbh
Multidrug efflux system, subunit A {ECO:0000313|EMBL:CBJ35558.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
SCNpilot_expt_1000_bf_scaffold_4393_curated_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13271..14167
DNA (897bp) protein (299aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAC1_9BRAD rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:ERF81421.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
acriflavin resistance protein; K07788 RND superfamily, multidrug transport protein MdtB rbh
Displaying 20 items

View Taxonomy