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SCNpilot_expt_1000_bf_scaffold_4391_curated_16

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(18212..18817)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 201.0
  • Bit_score: 330
  • Evalue 1.50e-87
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 201.0
  • Bit_score: 326
  • Evalue 8.40e-87
  • rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=LEUD_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 201.0
  • Bit_score: 326
  • Evalue 2.70e-86
  • rbh

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAACCGTTCAAGACCCTGTCGGGCGTCGCCGCCCCCCTGAACATGATCAATGTCGACACCGACATGATCATCCCGAAACAATATCTGAAGACCATCCAGCGCACCGGCCTGGGCAAGGCGCTGTTCGACGAGATGCGCTTCAACCCCGACGGCAGCGAAAAGCCCGATTTCGTGCTCAACAAGCCGGCCTATCGCCAGGCCAAGATCCTGGTGGCGGGCGACAATTTCGGCTGCGGCTCCAGCCGCGAGCACGCTCCCTGGGCGCTGCTGGATTTCGGCATCCGCTGCATCATCGCCCCCAGCTTCGCCGACATCTTCTATGGCAATTGCTTCAAGAACGGCATTCTGCCGATCAAGCTGCCGCAGGCGATCGTGGACAAGCTGATGGACGATGCCGAGCGCGGCGCCAACGCCATCATCTCGATCGACCTGGAAAAGCAGGAAATCAAGGGCCCCGACGGCGGCACCGTGACCTTCGAGGTGGACCCCTTCCGCAAGCAGTGCCTGCTGAACGGCTGGGACGATATCGGCCTGACCATGCGGGGCGTGGACAAGATCGCGGCCTATGAAAAGACGCAGTCCACCCAGCAGCCCTGGATTTAA
PROTEIN sequence
Length: 202
MEPFKTLSGVAAPLNMINVDTDMIIPKQYLKTIQRTGLGKALFDEMRFNPDGSEKPDFVLNKPAYRQAKILVAGDNFGCGSSREHAPWALLDFGIRCIIAPSFADIFYGNCFKNGILPIKLPQAIVDKLMDDAERGANAIISIDLEKQEIKGPDGGTVTFEVDPFRKQCLLNGWDDIGLTMRGVDKIAAYEKTQSTQQPWI*