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SCNpilot_expt_1000_bf_scaffold_5101_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 4530..5243

Top 3 Functional Annotations

Value Algorithm Source
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 237.0
  • Bit_score: 358
  • Evalue 2.30e-96
  • rbh
Ribonuclease PH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RNPH_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 237.0
  • Bit_score: 358
  • Evalue 7.50e-96
  • rbh
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_00564}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 237.0
  • Bit_score: 358
  • Evalue 1.00e-95

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGCCCTTCAACTCGCCAGTCCGATCAGATGCGGGCGGTTTCCCTGACCCCGGGCTTTGCCCGCCATGCCGAGGGGTCGTGCCTGGTCAAGTTCGGCGACACCCATGTGCTGGCCACCGCCAGCCTGGAAGAAAAGGCCCCGCCCTTCCTCAAGGGCACCGGCAAGGGCTGGGTGACGGCGGAATACGGCATGTTGCCCCGCTCCACCCATGACCGGATGCGGCGCGAGGCGGCAAGTGGCAAGCAAACGGGAAGAACCCACGAGATCCAGCGGCTGGTGGGGCGCTCCCTGCGCGCGGTCTGCGACCTGACGGCGCTGGGCGAACGCCAGATCGTGATCGACTGCGATGTGTTGCAGGCCGATGGCGGCACCCGCACCGCCGCCATCACCGGCGGCTTTGTCGCGCTGGCCCAATGCGTCGCCTTCATGAAGAAGGTGGGCATGGTCAGCGCACCCGTCATCCGCGAGCATGTCGCGGCGGTGAGCTGCGGCATCTCGAATGGCGTGCCGGTGCTGGACCTGGATTATGACGAGGATTCCAAGGCCGAGACCGACGCCAATTTCGTCATCACCGGATCGGGCGGACTGGTGGAAATCCAGGGCACCGCCGAAGGCGCGCCCTTCAGCGAGGATGAGTTCCTCAAACTGCTGGCGCTGGCGCGCAAGGGCGTGGGCGAGCTGGTGACGTTGCAGAAGCAGGCGCTGGCCTGA
PROTEIN sequence
Length: 238
MRPSTRQSDQMRAVSLTPGFARHAEGSCLVKFGDTHVLATASLEEKAPPFLKGTGKGWVTAEYGMLPRSTHDRMRREAASGKQTGRTHEIQRLVGRSLRAVCDLTALGERQIVIDCDVLQADGGTRTAAITGGFVALAQCVAFMKKVGMVSAPVIREHVAAVSCGISNGVPVLDLDYDEDSKAETDANFVITGSGGLVEIQGTAEGAPFSEDEFLKLLALARKGVGELVTLQKQALA*