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SCNpilot_expt_1000_bf_scaffold_5101_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7437..8672)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 398.0
  • Bit_score: 321
  • Evalue 1.90e-84
putative branched-chain amino acid ABC transporter, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 411.0
  • Bit_score: 304
  • Evalue 7.00e-80
  • rbh
Putative branched-chain amino acid ABC transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGF3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 411.0
  • Bit_score: 304
  • Evalue 2.20e-79
  • rbh

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGACCGGCTCGACCCTCGCCCGCCCGATGCGTTTTCTTGGCCGCTTTTGTGCCATTGCCGCGCTGGTTGCGATAGCCGCCTGTACCCAGCGGCCCGAGGCCCCGCCCGCCCCGGTGGTGGTGGCGCCGCCCGCCCCCACCGCCGCCAATCCGCTGGACCGGGACCGGCCCGAATATCTGCGCCTGCCCGGCCAGCCCGAAGGCACCCCGGTGCGGGTGGGCGTGATCCTGCCCTTTTCCAGCGGCGCGCCCGCCACCCGCGCCCTGGCCGCCTCCATGCTCAAGGCGGCGCAACTGGCCATGTTCGATGCGGGCAACCCCAACATCCTTCTGATGACCGCCGACGAGGGCAATGGCGGGGCGCAGGCCGCCAATGCCGCCCGCACCCTGCTGGCGCAAGGCGCCGAGGTGATCGTGGGCCCGCTGTTCGGGCCTTCGGTGGCGGCGGTCGCTCCGGTGGCGCGCGACCGGGGCGTGCCGGTGCTGGCCTTCTCCACCGAAAAGACCGTGGCGGGCAACGGCGCCTATCTGCTGTCCTTCCTGCCCCAGACCCAGGTGCAGCGTGTGGTCCGCTGGGCCGCCGCCAACGGCCATCGCAATTATGCGGCGCTCTTGCCCCAGACCGCCTATGGCGATGTCGCCAACGCCGCCTTCGCGGATTCGGTGGCCTCGGTGAAGGGCAATATCGTCGCCATCCAGCGTTTCGCACCCAACGCCGCCGCCGCGATGGGGCCGGCCAGCAGCGTGGCCAAGAGCGGCGCCGACGCGGTGTTGATCGCCCAGGGCGGCACGGTGCTGAAAGCCATCGGCCCCACCTTGAGCCTGGACGGCATGGGCCGCGACAAGGTGCGGCTGCTGGGCACCGGCCTGTGGGACGATCCGGGGCTGGAACGTGAAGCCTCGCTGCAGGGCGGTTGGTATGCCGCGCCCGCGCCCAATGCCGATGCCGATTTCAGCGCCAGATACCGCACCGCCTTCGGCGCGGCCCCCGTCCAATTGTCGTCGCTGGCCTATGACGCCATGTCGCTGGTGGCGCTGCTGAGCCAGGGCCCGGCCTATCATCGCTTCACCCCGGCGGCCTTGATGGACCCCAACGGTTTTTCGGGCGTGAACGGCATCTTCCGCTTCAATGCCGACGGTACCTCCGAACGCGGGCTGGCGGTGCTGGAAATGACGCCGAACGGCCCCATCGTGGTCAGCCCCGCGCCGACGACGTTTCAAGGGAAGAATTCCTGA
PROTEIN sequence
Length: 412
MTGSTLARPMRFLGRFCAIAALVAIAACTQRPEAPPAPVVVAPPAPTAANPLDRDRPEYLRLPGQPEGTPVRVGVILPFSSGAPATRALAASMLKAAQLAMFDAGNPNILLMTADEGNGGAQAANAARTLLAQGAEVIVGPLFGPSVAAVAPVARDRGVPVLAFSTEKTVAGNGAYLLSFLPQTQVQRVVRWAAANGHRNYAALLPQTAYGDVANAAFADSVASVKGNIVAIQRFAPNAAAAMGPASSVAKSGADAVLIAQGGTVLKAIGPTLSLDGMGRDKVRLLGTGLWDDPGLEREASLQGGWYAAPAPNADADFSARYRTAFGAAPVQLSSLAYDAMSLVALLSQGPAYHRFTPAALMDPNGFSGVNGIFRFNADGTSERGLAVLEMTPNGPIVVSPAPTTFQGKNS*