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SCNpilot_expt_1000_bf_scaffold_4508_curated_20

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 14460..14777

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 101.0
  • Bit_score: 143
  • Evalue 2.40e-31
Integration host factor subunit alpha n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0A5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 105.0
  • Bit_score: 140
  • Evalue 1.10e-30
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 105.0
  • Bit_score: 136
  • Evalue 3.80e-30

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 318
ATGACCACGGGAACTTTGACCAGAGCCGATCTGACCGAAGCGGTTTTCCAGGCCGTGGGCCTGTCGCGCACCGACTCGGCCCAGATGGTCGAGGACATGCTGGAGGAAGTCTGCGGCGCCCTGGCCAAGGGCGAGACGGTGAAGCTGTCGTCCTTCGGCACCTTCGCGGTGCGCCAGAAGTCCCAGCGCATGGGCCGCAATCCCAAGACCGGCGACGAAGTGCCGATCGCGCCCCGCCGTGTGCTGGTGTTCCGGCCCAGCCATGTGCTGAAGGCGGTGATCAACGGCCAGGCCGTATCCGGCGAAGGCGAAGACTAA
PROTEIN sequence
Length: 106
MTTGTLTRADLTEAVFQAVGLSRTDSAQMVEDMLEEVCGALAKGETVKLSSFGTFAVRQKSQRMGRNPKTGDEVPIAPRRVLVFRPSHVLKAVINGQAVSGEGED*