ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5918_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7270..8112)

Top 3 Functional Annotations

Value Algorithm Source
hopanoid biosynthesis associated protein HpnK n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B790ED similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 281.0
  • Bit_score: 359
  • Evalue 2.30e-96
  • rbh
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 274.0
  • Bit_score: 342
  • Evalue 4.10e-91
hopanoid biosynthesis associated protein HpnK similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 278.0
  • Bit_score: 334
  • Evalue 3.30e-89
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
TTGAAACGGCTCATCGTCACGGCGGACGATTTCGGTGCGTCTTCCGAAGTCAATGAAGGTGTCGAACGCGCCCATCGTGACGGCATCCTGTCCGCCGCCAGCCTGATGGTGTCGGGCGAGGCCGCCGCCGATGCGGTGGCCCGCGCCCGCGCCCTGCCGTCGCTGCGGGTGGGCCTGCATCTGGTGCTGGTGGAGGGCCGCCCCGTCCTGCCGCCGCAGGTGGTGCCCGACCTGGTGGATGGCCGCGGTTTTTTCCGCACCGACATGGCCCGCGCCGGGGCGGCGATGTTCTTCCTGCCGCATGTGCGCCGCCAGCTGGCCGCCGAGATCGAGGCCCAGTTCGCCGCCTTCGCCGCCACCGGCCTGGGCCTGGACCATGTCAACGCGCACAAGCATTTCCATCTGCATCCCACCATCGCCGCGCTGATCGTGAAGACCGGCGCCGCCCATCGGGTGCGGGGCGCGCGGGTGCCGCTGGAGCCGCAGGCCGTGCTGGCGCGGATCGAACCCCACCGGCCGTCCGGGGTGGTGGCGTTGACCACCCCCTTTGCCCGCGCCCTGCGGGGCCGATTCCGCCGCGCCGGGATCGCCGCGCCCGATTCGGTGTTCGGCCTGGCCTGGTCCGGGGCGATGACGCCCGACCGGCTGGCGGGGTTGCTGCGGCATCTGCCGGACGGGCTGTCGGAAATCTACATGCACCCCGCCACCGGGCCCTATCCCGGCTCGGCCCCCGGCTACCGCTATGCCGAGGAACTGGCGGCGCTGACCGATCCGCGTATGCCCGGTCTGATTTCGCAGGAGCACATTCGGGTTGGCGGCTTCGGGGACTTTCCGGTACAATGA
PROTEIN sequence
Length: 281
LKRLIVTADDFGASSEVNEGVERAHRDGILSAASLMVSGEAAADAVARARALPSLRVGLHLVLVEGRPVLPPQVVPDLVDGRGFFRTDMARAGAAMFFLPHVRRQLAAEIEAQFAAFAATGLGLDHVNAHKHFHLHPTIAALIVKTGAAHRVRGARVPLEPQAVLARIEPHRPSGVVALTTPFARALRGRFRRAGIAAPDSVFGLAWSGAMTPDRLAGLLRHLPDGLSEIYMHPATGPYPGSAPGYRYAEELAALTDPRMPGLISQEHIRVGGFGDFPVQ*