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SCNpilot_expt_1000_bf_scaffold_5918_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 14606..14932

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator {ECO:0000313|EMBL:KHK89630.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 104.0
  • Bit_score: 148
  • Evalue 4.40e-33
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFK5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 106.0
  • Bit_score: 146
  • Evalue 1.60e-32
transcriptional regulator protein; K10947 PadR family transcriptional regulator, regulatory protein PadR similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 107.0
  • Bit_score: 143
  • Evalue 5.40e-32

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACGGAATCGCTGCAGATCCAACTCAAGAAGGGCGTGCTGGAAATGTGCGTCCTGGCCCTGCTGAGCCGGGGCGACAATTACGCCTATGACATCGCCGCGCGCATGGCCGAGGCGGTGGGCATGGGCGAAGGCACCATCTACCCGCTGATGCGCCGGATGCAGAATGAGGGGCTGGTGACGACCTATCTGCGGGAGTCCAGCGGCGGCCCGCCGCGCAAATACTACAAGCTCACCAAAAGCGGGGCGCTGGCGCTGGAAGCCCAGATCCGCGAATGGCTGGCCTTCGAGGCCGCGGTGCAGAAGATCCTGGGAGACATCAAATGA
PROTEIN sequence
Length: 109
MTESLQIQLKKGVLEMCVLALLSRGDNYAYDIAARMAEAVGMGEGTIYPLMRRMQNEGLVTTYLRESSGGPPRKYYKLTKSGALALEAQIREWLAFEAAVQKILGDIK*