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SCNpilot_expt_1000_bf_scaffold_12105_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2981..3439)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III chi subunit HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 151.0
  • Bit_score: 175
  • Evalue 1.10e-41
DNA polymerase III chi subunit HolC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 151.0
  • Bit_score: 175
  • Evalue 3.40e-41
DNA polymerase III chi subunit HolC {ECO:0000313|EMBL:ABS64940.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 151.0
  • Bit_score: 175
  • Evalue 4.70e-41

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACCGAAACCCTGTTCTATCATCTGGAGCGCCGCGCCCTGGAGGATGTCCTGCCCGGGCTGGTGGAAAAGTCGCTGCAACGCGGCTGGCGGGCGCTGATCCGGGCCGACAGCGCCGACCGCGCCGACGCGCTGGATACGCGGCTGTGGACCTATGACGAGGCCAGTTTCCTGCCCCATGCCCAGCAGGGCGACGGCGAGGCGGCGGGCCAGCCGGTGCTGATCACGCTGGAAGAGGGCAATCCCAATTCCGCCAACATCGTCTTTTATGTCGGCGGGGCCTTGCCCGCCGACTGGCCGGCGCTGGCGGACCTGTCGCGCATCGTGCTGCTGTTCGACGGCCGCGACGGCGCGGCGCTGGACGCGGCCCGCGCCGCCTGGAAAGAGGCCCGGGCGGCGGGGCATGACGTGACCTACTGGAAGGAAAGCCCTTCCGGAAAATTTGAAAAACAGAATTAG
PROTEIN sequence
Length: 153
MTETLFYHLERRALEDVLPGLVEKSLQRGWRALIRADSADRADALDTRLWTYDEASFLPHAQQGDGEAAGQPVLITLEEGNPNSANIVFYVGGALPADWPALADLSRIVLLFDGRDGAALDAARAAWKEARAAGHDVTYWKESPSGKFEKQN*