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SCNpilot_expt_1000_bf_scaffold_12105_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12105_curated_1
unknown

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comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12105_curated_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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831..1043
DNA (213bp) protein (71aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Rhizobium sp. CF080 RepID=J2R7B8_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EUB95056.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
yheS; ABC transporter ATP-binding protein YheS
SCNpilot_expt_1000_bf_scaffold_12105_curated_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1154..2185
DNA (1032bp) protein (344aa)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0R1_9PROT rbh
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
SCNpilot_expt_1000_bf_scaffold_12105_curated_4
unknown

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comp(2220..2345)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12105_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2981..3439)
DNA (459bp) protein (153aa)
DNA polymerase III chi subunit HolC; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III chi subunit HolC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYF7_PARL1
DNA polymerase III chi subunit HolC {ECO:0000313|EMBL:ABS64940.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_12105_curated_6
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3482..3847)
DNA (366bp) protein (122aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKP4_HIRBI
SCNpilot_expt_1000_bf_scaffold_12105_curated_7
unknown

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4101..4280
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12105_curated_8
unknown

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4662..5042
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying 8 items

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