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SCNpilot_expt_1000_bf_scaffold_14648_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2098..4692)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZA0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 769.0
  • Bit_score: 994
  • Evalue 5.70e-287
  • rbh
DNA ligase D {ECO:0000313|EMBL:EJN10421.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 769.0
  • Bit_score: 994
  • Evalue 8.00e-287
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 780.0
  • Bit_score: 993
  • Evalue 5.20e-287
  • rbh

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Taxonomy

Bradyrhizobium sp. YR681 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2595
ATGGCCGCGCATCGCCGGAAAACCGCCAAAAAAGCCGTGAAAAGGGCCGTCCCCAAAGCTTCGGCGAAGAAGGCTTTGGCCAAATACCGCGCCATGCGCGATTTCGCGGTGACGACCGAACCCAGCGGTGCGGCGGGCGCCGTCAAACCGTCGCGCCGCCTGCGCTATGTCATCCAGAAACATGCCGCCACCCGGCTGCATTACGACTTCCGGCTGGAGCTGAATGGCACCTTCCGCTCCTGGGCGGTGACGCGCGGTCCCTCGCTGGACCCCGCCGACAAGCGGCTGGCGGTGGAGGTGGAAGACCATCCGCTGGATTATGGCGACTTTGAGGGCACCATTCCCAAGGGCCAGTATGGCGGCGGCACCGTCATGCTCTGGGACCGCGGTTATTGGGAGCCGGACGGCGACCCCGACCGGATGCTGGCCAAGGGCGACCTGAAATTCACCCTGGACGGCGAAAAGCTGCACGGTTCCTGGGTTCTGGTGCGGATGAAGACCGACAGGTTCAAGAGCAAGCGCACCAACTGGCTTCTGATCAAGCACCGGGACGAATATGCCAGGGCGGGCCAGGGCGAGGCGATCCTGGCGCAGGACCGTTCGGTGGCGTCGGGCCGCGCCATGACCGCCATCGAAAAAGGCACCGGCCGCACGCCCAAGCCCTTCATGCGGGCACAGGCGTTCAAAGCCGACGCGATCTGGCAGTCCAAGGCGCGGGGCGCGGCGGACATGCCGGAACCGGCCCGGAAACCTGTCCGGGAAACCGCCGCCAGACCAAAAGTCAGCCCAAAACAGGCCGCTCATCTGCCGCGTTTCGTGGAACCCCAGCTTTGCCGCCTGGTGGATACCCCGCCGTCCGGCGCGGGCTGGCTGCATGAAGTGAAATTCGACGGCTACCGAATGCAGTTGCGTGTGGAAGGCGGCAAGGCACGGCTGCTCACCCGCAAGGGGCTGGACTGGACCGACAAGTTCGCCGCCATCGCAAGAGCCGCCGCGAAACTGCCCGACAGCATTATCGATGGCGAGATCTGCGCCCTGGACCATAACGGCGCGCCGGATTTCGCGTCGCTGCAGGCGGCGCTGTCGGACAGCCAGTCGGACAGCCTGATCTTCTTCGCCTTCGACCTGATGTTCCTGGACAAACAAGACCTGCGCGCCCTGCCCTTGACGGAGCGCAAGGCGCGGCTGGAGGCGCTGCTGAAAACCGCCGGCACGCTGCGCTATGTCGCGCATTTCGCCAGCGGCGGCGACGCGGTGCTGCAATCGGCCTGCCGGATGAACCTGGAAGGTATCGTCTCCAAGCGTGCCGATGCCCCCTATCGCGGCGGGCGCGGCGACGACTGGACCAAATCCAAGTGCCGCGCCGGGCATGAAGTGGTGATCGGCGGCTGGAGCACCACGGCGGGGAAATTCCGCTCCCTGCTGGTGGGCGTGCATCGCGGCGACCATCTGGTCTATGTAGGGCGGGTCGGCACCGGCTATTCCGCCGCCAAGGTCAAGCTGCTGCTGCCGCGCCTCAAGCAGATGGCGGCACGGGAAAATCCCTTCGGCGGCCGCAACGCGCCGCGCCGGGCGGCGGGCGTGCATTGGGTGAAGCCCGAACTGGTGGCGGAGATCGAATTCGCGGGCTGGACCGGCGACGGCAATGTGCGCCAGGCCGCCTTCAAGGGCCTGCGGGCCGACAAGCCCGCCGCCGAAGTGGAAGCCGAGACGCCGAAGACGGACAAAGCGCTGGCGATGCCGAAAAAAGCACCGAAGACAGCGCCAGGCGGTTCGGTGGTGATGAACCAGCCCATCTCCAACCCCGACAAGCCGCTCTGGCCCGATGCGGGCGATGGCGAACCCGTCACCAAACTGGAACTGGCGCGCTATTACCAGGCGGTGGCGGACTGGATGCTGCCGCATATCCAGGGCCGCCCCTGTTCCCTGGTGCGCGCGCCGGACGGGATCACGGGGGCGCAGCGTTTCTTCCAGCGCCATGCCGGGGCGGGACAGTCAACCCTGTTCACGCAAGTGAAAATATCCGGCGACCGCAAGCCCTATCTGCAGATCGACCGGCCCGAAGCGCTGGCGGCGGCGGCGCAAGCCGGCGTCCTGGAACTGCATCCCTGGAACTGCGCGCCGGGCAAGCCCGATGTACCGGGACGGTTTGTGTTCGATCTCGATCCCTCGCCGGGACTGGATTTCATGGCTGTGATCGCGGCGGCGAAGGAATTGAAAGACAGGCTGGAACAGTTGGGCCTGGTGCCTTTCGCCAAGACCACCGGCGGCAAGGGTCTGCATGTTGTGGTCCCNNNNNNNNNNGGCCAAGGCCATCGCCCGCGCAATCTGCGCCCGCATGGCCGCCGACAGCCCGGACAAGTATCTGATCAATATGTCCAAGGCCAAACGGGCGGGAAAGATATTCCTCGACTATCTGCGCAACGACCGCATGGCGACGGCGGTGGCGCCGCTGTCGCCACGCGCCCGCGAAGGCGCCACCGTGTCCATGCCGCTGACCTGGGCGCAGGTGAAGAAAGGACTGGATCCCAAATCCTTCACCATCCGCACCGCGCCGGGCCTGATCGGAAAAAGCGCGGCCTGGAAGGATTATGA
PROTEIN sequence
Length: 865
MAAHRRKTAKKAVKRAVPKASAKKALAKYRAMRDFAVTTEPSGAAGAVKPSRRLRYVIQKHAATRLHYDFRLELNGTFRSWAVTRGPSLDPADKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPDGDPDRMLAKGDLKFTLDGEKLHGSWVLVRMKTDRFKSKRTNWLLIKHRDEYARAGQGEAILAQDRSVASGRAMTAIEKGTGRTPKPFMRAQAFKADAIWQSKARGAADMPEPARKPVRETAARPKVSPKQAAHLPRFVEPQLCRLVDTPPSGAGWLHEVKFDGYRMQLRVEGGKARLLTRKGLDWTDKFAAIARAAAKLPDSIIDGEICALDHNGAPDFASLQAALSDSQSDSLIFFAFDLMFLDKQDLRALPLTERKARLEALLKTAGTLRYVAHFASGGDAVLQSACRMNLEGIVSKRADAPYRGGRGDDWTKSKCRAGHEVVIGGWSTTAGKFRSLLVGVHRGDHLVYVGRVGTGYSAAKVKLLLPRLKQMAARENPFGGRNAPRRAAGVHWVKPELVAEIEFAGWTGDGNVRQAAFKGLRADKPAAEVEAETPKTDKALAMPKKAPKTAPGGSVVMNQPISNPDKPLWPDAGDGEPVTKLELARYYQAVADWMLPHIQGRPCSLVRAPDGITGAQRFFQRHAGAGQSTLFTQVKISGDRKPYLQIDRPEALAAAAQAGVLELHPWNCAPGKPDVPGRFVFDLDPSPGLDFMAVIAAAKELKDRLEQLGLVPFAKTTGGKGLHVVVXXXXGQGHRPRNLRPHGRRQPGQVSDQYVQGQTGGKDIPRLSAQRPHGDGGGAAVATRPRRRHRVHAADLGAGEERTGSQILHHPHRAGPDRKKRGLEGL*