ggKbase home page

SCNpilot_expt_1000_bf_scaffold_14648_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5302..5709

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 133
  • Evalue 4.10e-29
Probable DNA repair protein PHZ_c3262 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAS3_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 133
  • Evalue 1.30e-28
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 133
  • Evalue 1.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCACGGCCGAGAGCGGCTGGTGGCGCTGGAGCCGCGCGACAAGGGGATGCTCTGCTACACCCTGCGGATGGGCGATGAAGTGGTGCAGCCCAAGGACGCTTTCGCGGACATCCCCGCCGGCCGGCCCAACAAGGAAATGATCGAGATCGCCCGCAAGATCATCGAGCAGAAGGAAGGCGCGTTCGAGCCGGAGCGCTTCGAGGATCGCTATGAGAATGCCCTGCGCGACCTGATCCGGCGCAAGCAGAAGGGCGAAAAGCTGGTCACCGCCGAGCCGGTGCAGGAAGACAATGTCATCGACCTGATGGAGGCGCTGAAGCGAAGCCTGAAAGGCCAGGCAAAGATGCAGGTCAAGGCGCCGCCCAAGACGCAATCGGTGAAGAAGCGCACCCGCAAACGCGCCTGA
PROTEIN sequence
Length: 136
MHGRERLVALEPRDKGMLCYTLRMGDEVVQPKDAFADIPAGRPNKEMIEIARKIIEQKEGAFEPERFEDRYENALRDLIRRKQKGEKLVTAEPVQEDNVIDLMEALKRSLKGQAKMQVKAPPKTQSVKKRTRKRA*