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SCNpilot_expt_1000_bf_scaffold_6985_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2..1909

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic|GH23 {ECO:0000313|EMBL:CDO61400.1}; EC=4.2.2.- {ECO:0000313|EMBL:CDO61400.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 644.0
  • Bit_score: 435
  • Evalue 1.10e-118
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 643.0
  • Bit_score: 412
  • Evalue 2.80e-112
  • rbh
Lytic transglycosylase catalytic n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX35_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 643.0
  • Bit_score: 412
  • Evalue 8.90e-112
  • rbh

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
TTCACCCGCGCCTTCCTGGCGGCGGACCGGGGCGATTGGGTGGGGGCGCGGTCGCTGGCCGCCCAGGGCCAGAACGTCATCGCCCGCCGCCTGCTGGAATGGCGCTATGCGCTGGACCGCAACAGCGGCGCGACCTTCGCCGAGATCGACGCGGTGCTGCGCGATGCGCCCGCCGCCTGGCCGCTGCGCGGCACCTTGCAGGCCCGCGCCGAGGCCGCGATCACGCCCGACATGGGACCGGCCGCCATCGTGTCCTGGTTCGGCAACCGCGAACCCAATTCCAGCATCGGCAAAATCCGGCTGGGCGAGGCGCTGGTGGCCACCGGTCAAACCCAGCGCGGCGCGGCACTGATCCGCCAGGGCTGGATCGAGGGCAGCTTCGACACCGCCACCGAACGCGACATCGCGCAGAAGGACGCCGCCTGGCTGACGCCCGAGGCCGACCGCGCCCGGCTGGACAACCTGCTCTGGGCCGGACAGGTGACGGCGGCCAAGCGGCTGCTGGCGCGGGTGGACGGGCGCGCCGCCGACATCGCCAATGCCCGCATGGCGCTCTATACCGGTTACGACAAGGCGCAAGCTGCCTTGGACAAGGTGGCCGGGTCCACCGATCCCGCCCTGCTGTTCGACTGGTCGCGGGCGCTGCGGATGGCCGGGCGCGCCGCCGAGGCCCGCGCCATGCTGCTGCGGGTGCCCGCCGCGCCGCTGGTCAAGGCACAGCCCACCCGCTGGTGGAACGAAAGCAACCTGCAGGCTCGCGAGGCCCTGAAGGACGGCGATCCGCGCACCGCGCTGGCCTTGACGCAACATGCCGGGTTCACGGCCGGCAATCCGTTCGCCGAGCAGCAATTCCTGGCGGGCTTCATCAGCCTGCGTTTCCTCAAGGAGCCCAAAGCCGCGCTGACCCTGTTCCAATCGCTGGAAGCGGGCGTGCGTATGCCCATCAGCAAAAGCCGCGCCCTCTACTGGCAGGGGCGCAGCCAGGAGGCGCTGGGCGACAATGCCGCCGCCGTCACCGCCTATCGCAAGGCGGGCACGCTGTCCGAGACCTTCTACGGCCAGCTGGCCCTGGCCCGCACCGATGCGGCCCCCATGATGCACCTGACCGATGTGATCGTGGAGGCGGCCGCGCCCAGCGAGGTGGAGCGGGCCAGCCTGAGCGACGAAATCCGCGTGCTGGCCGAACTGGGGCAGGCGGCGACCCTGCGCAGCTTCGTCAACCAGCAGGTGGCGGCCAACACCGCGCCCCGCTTCATCCGGCGGGTGATGATGAACATGACCGACTGGGGCTATCCGGAGATCGCCCTGCGGCTGGCCAAGGGCCTGGGCTATGACGGGATGCTGATGCCGCAATTCGGCTATCCGGTGATCGCCCTGCCCGCCTATCCGGGGCCCGGCGCGGCCCCCGATCCGGCGCTGGTGCACGGCCTGATCCGGCAGGAAACCGAGTTCGACGCCTTTGCCGTCTCCAGCGCCGGGGCGCAGGGCCTGATGCAGATGATGCCCGCCAGCGCCAAGACGGCGGCCAAGCAGGCGAACCTGCCCTACCGGCCCGAGGCGCTTTTGACCGACACCAGCTACAACATGCAGCTGGGCATGACCGAGTATCGCGTCCATCTGGACCGTTACGGCGGCAGCCTGGTGCTGGCGGCGGCGTCCTACAATGCGGGGCCGGGCAATGCGCGCAAATGGCTGGCGGCCTATGGCGATCCGCGCAGCGGCACGGTGGACCCGGTGGACTGGATCGAGCAGATCCCCTTCGCGGAGACCCGCAACTATGTGCAGCGGGTGATCGAGAACACCCAGGTCTATCGCGCCCGGCTGGCAGGCAAGGATGTGCCGCTGAAGGTGCTGACCGATCTGTATGCGCCGGTGGCGCCGCCGACGGCGGTGCTGGCGATCAAGTAG
PROTEIN sequence
Length: 636
FTRAFLAADRGDWVGARSLAAQGQNVIARRLLEWRYALDRNSGATFAEIDAVLRDAPAAWPLRGTLQARAEAAITPDMGPAAIVSWFGNREPNSSIGKIRLGEALVATGQTQRGAALIRQGWIEGSFDTATERDIAQKDAAWLTPEADRARLDNLLWAGQVTAAKRLLARVDGRAADIANARMALYTGYDKAQAALDKVAGSTDPALLFDWSRALRMAGRAAEARAMLLRVPAAPLVKAQPTRWWNESNLQAREALKDGDPRTALALTQHAGFTAGNPFAEQQFLAGFISLRFLKEPKAALTLFQSLEAGVRMPISKSRALYWQGRSQEALGDNAAAVTAYRKAGTLSETFYGQLALARTDAAPMMHLTDVIVEAAAPSEVERASLSDEIRVLAELGQAATLRSFVNQQVAANTAPRFIRRVMMNMTDWGYPEIALRLAKGLGYDGMLMPQFGYPVIALPAYPGPGAAPDPALVHGLIRQETEFDAFAVSSAGAQGLMQMMPASAKTAAKQANLPYRPEALLTDTSYNMQLGMTEYRVHLDRYGGSLVLAAASYNAGPGNARKWLAAYGDPRSGTVDPVDWIEQIPFAETRNYVQRVIENTQVYRARLAGKDVPLKVLTDLYAPVAPPTAVLAIK*