ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4158_curated_28

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 21593..22132

Top 3 Functional Annotations

Value Algorithm Source
signal peptide similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 170.0
  • Bit_score: 76
  • Evalue 7.90e-12
Possible signal peptide n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRV8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 170.0
  • Bit_score: 76
  • Evalue 2.50e-11
Possible signal peptide {ECO:0000313|EMBL:CCH13799.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 170.0
  • Bit_score: 76
  • Evalue 3.50e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCCTGGCTGCAAGGCAAGGCGGCAGCCGCCGCCGCCATCGCGCTGGCTTTGCTGCTGGCCTGGCAGACGGCGCGGATCGAGGGTCTGCCGCTGGCCGGCGGCGGCTTCAAACAGGCGGTCGCGGCGCTGGAGAAAGACATTGCCGCCCACGATCTGCGTGACGCTAGGGCGCGTGCCGAGGCGCTGGCCGCAAGCGCACGGATCCAGGCGCGCATGAATACGGTTGCTGCCGCGCATCTGGCCGCCGGCCGCGGCATCCAGACTCAAATCCAGACCGTGATCGAGAAGGTGCCTGTCTATGTCCCTGCCAAGGCTGATGCTGAGTGCCGTATTCCCTGGGGCGCTGTGCGCCTGCTCGACGCCGCCGCCAGCGGCGCCGGTCTCGCCGATAGTGGCGCCCGTGTCGGTCCCGGCCAGCCTGATGACGCCGCCTCGGACGTTACGCTGTCTGAGGCTGTCGCCCTGCTCGCCGCGAATGCCGGATTCGCAAGACAGAATGCCGAACAGTTGACGGCGCTTCAGCAGGCCTATCCCTGA
PROTEIN sequence
Length: 180
MAWLQGKAAAAAAIALALLLAWQTARIEGLPLAGGGFKQAVAALEKDIAAHDLRDARARAEALAASARIQARMNTVAAAHLAAGRGIQTQIQTVIEKVPVYVPAKADAECRIPWGAVRLLDAAASGAGLADSGARVGPGQPDDAASDVTLSEAVALLAANAGFARQNAEQLTALQQAYP*