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SCNpilot_expt_1000_bf_scaffold_4158_curated_40

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 33034..33345

Top 3 Functional Annotations

Value Algorithm Source
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 100.0
  • Bit_score: 171
  • Evalue 1.40e-40
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRN4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 100.0
  • Bit_score: 171
  • Evalue 4.30e-40
Two component transcriptional regulator {ECO:0000313|EMBL:GAK45172.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 101.0
  • Bit_score: 171
  • Evalue 6.10e-40

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGGGCGTCAAGACCCGGCTGGATGTGGGCGACCTGGAACTGGATCTGCTGACCCGCGCCGCCAGGCGCAGCGGCACCGCGATCGAACTTCAGCCCCGCGAATTCCGCCTGCTGGAATATCTGATGCGCCATGCCGGACAGGTGGTGACGCGCACCATGCTGCTGGAAAGCGTGTGGGAGTATCACTTCGATCCCCAGACCAACGTGATCGACGTGCATATCAGCCGGTTGCGCGCCAAGATCGACAAGGGGTTCGAGGCGCCCCTGCTGCACACCGTGCGCGGCGCGGGCTACATGATTCGTGCCCATTAG
PROTEIN sequence
Length: 104
VGVKTRLDVGDLELDLLTRAARRSGTAIELQPREFRLLEYLMRHAGQVVTRTMLLESVWEYHFDPQTNVIDVHISRLRAKIDKGFEAPLLHTVRGAGYMIRAH*