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SCNpilot_expt_1000_bf_scaffold_4158_curated

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Displaying items 31-41 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4158_curated_31
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23193..23879
DNA (687bp) protein (229aa)
Transcriptional regulator {ECO:0000313|EMBL:KHJ54940.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator rbh
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6G2_POLGS rbh
SCNpilot_expt_1000_bf_scaffold_4158_curated_32
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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23950..25257
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
periplasmic sensor signal transduction histidine kinase rbh
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07QB1_RHOP5 rbh
SCNpilot_expt_1000_bf_scaffold_4158_curated_33
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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25421..26707
DNA (1287bp) protein (429aa)
Uncharacterized protein {ECO:0000313|EMBL:CDO60689.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRM3_PARL1
SCNpilot_expt_1000_bf_scaffold_4158_curated_34
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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26960..27565
DNA (606bp) protein (202aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZ25_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:BAJ81035.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_expt_1000_bf_scaffold_4158_curated_35
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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27790..28134
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB96025.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GYM1_9PROT
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4158_curated_36
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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28164..28607
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E8E9D0
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
cytochrome c-type biogenesis protein CcmE
SCNpilot_expt_1000_bf_scaffold_4158_curated_37
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29090..30532
DNA (1443bp) protein (481aa)
Cytochrome c heme lyase subunit CcmF {ECO:0000313|EMBL:CDO60697.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF rbh
heme lyase subunit CcmF n=1 Tax=Hoeflea sp. 108 RepID=UPI000367F52C rbh
SCNpilot_expt_1000_bf_scaffold_4158_curated_38
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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30529..30915
DNA (387bp) protein (129aa)
cytochrome C biogenesis protein
Cytochrome C biogenesis protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QM57_METSZ
Cytochrome C biogenesis protein {ECO:0000313|EMBL:CCJ06258.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_4158_curated_39
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31017..32555
DNA (1539bp) protein (513aa)
Serine protease {ECO:0000313|EMBL:KJB94126.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI00035DE0B9 rbh
protease Do rbh
SCNpilot_expt_1000_bf_scaffold_4158_curated_40
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33034..33345
DNA (312bp) protein (104aa)
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRN4_PARL1
Two component transcriptional regulator {ECO:0000313|EMBL:GAK45172.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_expt_1000_bf_scaffold_4158_curated_41
unknown

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33335..33418
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying items 31-41 of 41 in total

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